InterPro Scan Result: AT1G01040.1

SEQUENCE: AT1G01040.1 CRC64: EAA944F0C0C81D4C LENGTH: 1909 aa
InterPro
IPR000999
Domain
Ribonuclease III
G3DSA:1.10.1520.10[1497-1532]T 1.5e-35 G3DSA:1.10.1520.10 no description[1560-1734]T 1.8e-44 G3DSA:1.10.1520.10 no descriptionno description
PF00636[1375-1518]T 3.1e-26 PF00636 Ribonuclease_3[1594-1707]T 2.3e-25 PF00636 Ribonuclease_3Ribonuclease_3
SM00535[1357-1538]T 4.5e-40 SM00535 no description[1574-1730]T 1.2e-48 SM00535 no descriptionno description
PS00517[1594-1602]T NA PS00517 RNASE_3_1RNASE_3_1
PS50142[1361-1518]T 26.313 PS50142 RNASE_3_2[1559-1707]T 34.490 PS50142 RNASE_3_2RNASE_3_2
SSF69065[1333-1536]T 6.3e-37 SSF69065 RNase III domain-like[1555-1735]T 3.1e-40 SSF69065 RNase III domain-likeRNase III domain-like
InterPro
IPR001159
Domain
Double-stranded RNA-binding
PF00035[1734-1794]T 6.4e-07 PF00035 dsrm[1834-1904]T 2.1e-08 PF00035 dsrmdsrm
SM00358[1734-1795]T 1.2e-07 SM00358 no description[1832-1905]T 1.4e-10 SM00358 no descriptionno description
PS50137[1733-1796]T 11.625 PS50137 DS_RBD[1831-1906]T 11.286 PS50137 DS_RBDDS_RBD
InterPro
IPR001650
Domain
Helicase, C-terminal
PF00271[696-764]T 1.9e-14 PF00271 Helicase_CHelicase_C
SM00490[681-767]T 4.7e-10 SM00490 no descriptionno description
PS51194[651-812]T 14.702 PS51194 HELICASE_CTERHELICASE_CTER
InterPro
IPR003100
Domain
Argonaute/Dicer protein, PAZ
PF02170[1181-1340]T 1.2e-31 PF02170 PAZPAZ
SM00949[1180-1342]T 6.4e-40 SM00949 no descriptionno description
PS50821[1180-1318]T 30.051 PS50821 PAZPAZ
SSF101690[1178-1319]T 5.5e-15 SSF101690 PAZ domainPAZ domain
InterPro
IPR005034
Domain
Dicer double-stranded RNA-binding fold
PF03368[840-931]T 1.3e-27 PF03368 dsRNA_binddsRNA_bind
PS51327[840-935]T 24.916 PS51327 DICER_DSRBFDICER_DSRBF
InterPro
IPR006935
Domain
UvrABC complex, subunit B
PF04851[250-415]T 7.8e-12 PF04851 ResIIIResIII
InterPro
IPR014001
Domain
DEAD-like helicase
SM00487[245-448]T 1.5e-15 SM00487 no descriptionno description
PS51192[256-433]T 19.513 PS51192 HELICASE_ATP_BIND_1HELICASE_ATP_BIND_1
InterPro
IPR014720
Domain
Double-stranded RNA-binding-like
G3DSA:3.30.160.20[1735-1797]T 3.8e-05 G3DSA:3.30.160.20 no description[1835-1905]T 6.1e-15 G3DSA:3.30.160.20 no descriptionno description
noIPR
unintegrated
unintegrated
G3DSA:3.40.50.300[243-427]T 3.3e-42 G3DSA:3.40.50.300 no description[647-794]T 7e-20 G3DSA:3.40.50.300 no descriptionno description
PTHR14950[175-1811]T 0 PTHR14950 FAMILY NOT NAMEDFAMILY NOT NAMED
PTHR14950:SF14[175-1811]T 0 PTHR14950:SF14 SUBFAMILY NOT NAMEDSUBFAMILY NOT NAMED
seg[238-247]? NA seg seg[589-605]? NA seg seg[1478-1491]? NA seg seg[1782-1805]? NA seg seg[1808-1827]? NA seg segseg
SSF52540[295-789]T 5.1e-39 SSF52540 P-loop containing nucleoside triphosphate hydrolasesP-loop containing nucleoside triphosphate hydrolases
SSF54768[1688-1794]T 8.3e-15 SSF54768 dsRNA-binding domain-like[1825-1904]T 5.4e-11 SSF54768 dsRNA-binding domain-likedsRNA-binding domain-like
SEQUENCE: AT1G01040.1 CRC64: EAA944F0C0C81D4C LENGTH: 1909 aa
InterPro
IPR000999
Domain
Ribonuclease III
GENE3DG3DSA:1.10.1520.10no description
 1.5e-35 [1497-1532]T  1.8e-44 [1560-1734]T   
PFAMPF00636Ribonuclease_3
 3.1e-26 [1375-1518]T  2.3e-25 [1594-1707]T   
SMARTSM00535no description
 4.5e-40 [1357-1538]T  1.2e-48 [1574-1730]T   
PROSITEPS00517RNASE_3_1
 NA [1594-1602]T    
PROFILEPS50142RNASE_3_2
 26.313 [1361-1518]T  34.490 [1559-1707]T   
SUPERFAMILYSSF69065RNase III domain-like
 3.1e-40 [1555-1735]T  6.3e-37 [1333-1536]T   
Parentno parent
Childrenno children
Found inIPR011907
Containsno entries
GO termsMolecular Function: RNA binding (GO:0003723)
Molecular Function: ribonuclease III activity (GO:0004525)
Biological Process: RNA processing (GO:0006396)
InterPro
IPR001159
Domain
Double-stranded RNA-binding
PFAMPF00035dsrm
 6.4e-07 [1734-1794]T  2.1e-08 [1834-1904]T   
SMARTSM00358no description
 1.2e-07 [1734-1795]T  1.4e-10 [1832-1905]T   
PROFILEPS50137DS_RBD
 11.625 [1733-1796]T  11.286 [1831-1906]T   
ParentIPR014720
Childrenno children
Found inIPR009179IPR011907
Containsno entries
GO termsMolecular Function: double-stranded RNA binding (GO:0003725)
Cellular Component: intracellular (GO:0005622)
InterPro
IPR001650
Domain
Helicase, C-terminal
PFAMPF00271Helicase_C
 1.9e-14 [696-764]T    
SMARTSM00490no description
 4.7e-10 [681-767]T    
PROFILEPS51194HELICASE_CTER
 14.702 [651-812]T    
Parentno parent
Childrenno children
Found inIPR000185IPR004576IPR004589IPR004609IPR004807IPR005259IPR006293IPR006474IPR010222IPR010225IPR013444IPR014018IPR014412IPR016438IPR017170IPR017575IPR022307
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: helicase activity (GO:0004386)
Molecular Function: ATP binding (GO:0005524)
InterPro
IPR003100
Domain
Argonaute/Dicer protein, PAZ
PFAMPF02170PAZ
 1.2e-31 [1181-1340]T    
SMARTSM00949no description
 6.4e-40 [1180-1342]T    
PROFILEPS50821PAZ
 30.051 [1180-1318]T    
SUPERFAMILYSSF101690PAZ domain
 5.5e-15 [1178-1319]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR005034
Domain
Dicer double-stranded RNA-binding fold
PFAMPF03368dsRNA_bind
 1.3e-27 [840-931]T    
PROFILEPS51327DICER_DSRBF
 24.916 [840-935]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone
InterPro
IPR006935
Domain
UvrABC complex, subunit B
PFAMPF04851ResIII
 7.8e-12 [250-415]T    
ParentIPR014001
Childrenno children
Found inno entries
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: hydrolase activity (GO:0016787)
InterPro
IPR014001
Domain
DEAD-like helicase
SMARTSM00487no description
 1.5e-15 [245-448]T    
PROFILEPS51192HELICASE_ATP_BIND_1
 19.513 [256-433]T    
Parentno parent
ChildrenIPR006935IPR011492IPR011545
Found inIPR000330IPR003450IPR004473IPR004483IPR004589IPR004807IPR006293IPR006310IPR006474IPR010222IPR010225IPR017548IPR017575IPR022307
ContainsIPR000629IPR002464IPR010614IPR014013
GO termsnone
InterPro
IPR014720
Domain
Double-stranded RNA-binding-like
GENE3DG3DSA:3.30.160.20no description
 3.8e-05 [1735-1797]T  6.1e-15 [1835-1905]T   
Parentno parent
ChildrenIPR001159IPR013810
Found inIPR011907
ContainsIPR018192
GO termsMolecular Function: RNA binding (GO:0003723)
Cellular Component: intracellular (GO:0005622)
noIPR
unintegrated
unintegrated
GENE3DG3DSA:3.40.50.300no description
 3.3e-42 [243-427]T  7e-20 [647-794]T   
PANTHERPTHR14950FAMILY NOT NAMED
 0 [175-1811]T    
PANTHERPTHR14950:SF14SUBFAMILY NOT NAMED
 0 [175-1811]T    
SEGsegseg
 NA [238-247]?  NA [589-605]?  NA [1478-1491]?  NA [1782-1805]? 
 NA [1808-1827]?    
SUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolases
 5.1e-39 [295-789]T    
SUPERFAMILYSSF54768dsRNA-binding domain-like
 8.3e-15 [1688-1794]T  5.4e-11 [1825-1904]T   
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone