InterPro Scan Result: AT1G21650.3

SEQUENCE: AT1G21650.3 CRC64: EDB379218CEFF388 LENGTH: 1805 aa
InterPro
IPR000185
Family
SecA protein
PR00906[875-899]T 3.3e-58 PR00906 SECA[913-927]T 3.3e-58 PR00906 SECA[929-939]T 3.3e-58 PR00906 SECA[982-1002]T 3.3e-58 PR00906 SECA[1135-1157]T 3.3e-58 PR00906 SECA[1172-1189]T 3.3e-58 PR00906 SECA[1209-1222]T 3.3e-58 PR00906 SECASECA
MF_01382[810-1795]T 17.566 MF_01382 SecASecA
TIGR00963[836-1781]T 0 TIGR00963 secA: preprotein translocase, SecA subunitsecA: preprotein translocase, SecA subunit
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[513-550]T 0.014 SM00320 no description[553-593]T 0.68 SM00320 no description[599-641]T 0.057 SM00320 no description[644-681]T 0.00018 SM00320 no description[684-725]T 90 SM00320 no description[726-763]T 7 SM00320 no descriptionno description
InterPro
IPR001841
Domain
Zinc finger, RING-type
SM00184[6-50]T 8.9e-07 SM00184 no descriptionno description
PS50089[6-51]T 11.958 PS50089 ZF_RING_2ZF_RING_2
InterPro
IPR011009
Domain
Protein kinase-like domain
SSF56112[178-456]T 8.7e-06 SSF56112 Protein kinase-like (PK-like)Protein kinase-like (PK-like)
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[511-805]T 4.4e-48 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR011115
Domain
SecA DEAD-like, N-terminal
PF07517[822-1197]T 1.7e-107 PF07517 SecA_DEADSecA_DEAD
SM00957[814-1198]T 3e-230 SM00957 no descriptionno description
InterPro
IPR011116
Domain
SecA Wing/Scaffold
G3DSA:1.10.3060.10[1717-1791]T 2.4e-29 G3DSA:1.10.3060.10 no descriptionno description
PF07516[1517-1793]T 3e-59 PF07516 SecA_SWSecA_SW
SSF81886[1520-1794]T 2.8e-39 SSF81886 Helical scaffold and wing domains of SecAHelical scaffold and wing domains of SecA
InterPro
IPR011130
Domain
SecA preprotein, cross-linking domain
G3DSA:3.90.1440.10[1046-1163]T 6.5e-41 G3DSA:3.90.1440.10 no descriptionno description
PF01043[1045-1154]T 1.1e-30 PF01043 SecA_PP_bindSecA_PP_bind
SM00958[1043-1154]T 1.3e-42 SM00958 no descriptionno description
SSF81767[1042-1164]T 5.3e-42 SSF81767 Pre-protein crosslinking domain of SecAPre-protein crosslinking domain of SecA
InterPro
IPR013083
Domain
Zinc finger, RING/FYVE/PHD-type
G3DSA:3.30.40.10[2-87]T 1.2e-09 G3DSA:3.30.40.10 no descriptionno description
InterPro
IPR014018
Domain
SecA motor DEAD
PS51196[811-1519]T 130.556 PS51196 SECA_MOTOR_DEADSECA_MOTOR_DEAD
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[517-775]T 3.4e-39 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[520-734]T 24.099 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[520-550]T 0.00046 PF00400 WD40[556-593]T 1.9 PF00400 WD40[619-641]T 0.16 PF00400 WD40[647-681]T 9.8e-06 PF00400 WD40[740-761]T 0.41 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[520-559]T 10.976 PS50082 WD_REPEATS_2[651-690]T 11.544 PS50082 WD_REPEATS_2WD_REPEATS_2
InterPro
IPR020472
Repeat
G-protein beta WD-40 repeat
PR00320[537-551]T 4.6e-05 PR00320 GPROTEINBRPT[628-642]T 4.6e-05 PR00320 GPROTEINBRPT[668-682]T 4.6e-05 PR00320 GPROTEINBRPTGPROTEINBRPT
InterPro
IPR020937
Conserved_site
SecA conserved site
PS01312[1298-1313]T NA PS01312 SECASECA
noIPR
unintegrated
unintegrated
G3DSA:3.40.50.300[1164-1211]T 2.9e-98 G3DSA:3.40.50.300 no description[1419-1515]T 4.6e-72 G3DSA:3.40.50.300 no descriptionno description
PTHR22844[518-764]T 2.4e-50 PTHR22844 FAMILY NOT NAMEDFAMILY NOT NAMED
seg[123-133]? NA seg seg[656-668]? NA seg seg[1360-1372]? NA seg segseg
SSF52540[811-1211]T 6.8e-76 SSF52540 P-loop containing nucleoside triphosphate hydrolases[1212-1519]T 8e-42 SSF52540 P-loop containing nucleoside triphosphate hydrolasesP-loop containing nucleoside triphosphate hydrolases
SSF57850[1-66]T 1.1e-12 SSF57850 RING/U-boxRING/U-box
SEQUENCE: AT1G21650.3 CRC64: EDB379218CEFF388 LENGTH: 1805 aa
InterPro
IPR000185
Family
SecA protein
PRINTSPR00906SECA
 3.3e-58 [875-899]T  3.3e-58 [913-927]T  3.3e-58 [929-939]T  3.3e-58 [982-1002]T 
 3.3e-58 [1135-1157]T  3.3e-58 [1172-1189]T  3.3e-58 [1209-1222]T  
HAMAPMF_01382SecA
 17.566 [810-1795]T    
TIGRFAMsTIGR00963secA: preprotein translocase, SecA subunit
 0 [836-1781]T    
Parentno parent
ChildrenIPR022490
Found inno entries
ContainsIPR001650IPR004027IPR011115IPR011116IPR011130IPR014018IPR020937
GO termsMolecular Function: ATP binding (GO:0005524)
Biological Process: protein targeting (GO:0006605)
Biological Process: intracellular protein transport (GO:0006886)
InterPro
IPR001680
Repeat
WD40 repeat
SMARTSM00320no description
 0.014 [513-550]T  0.68 [553-593]T  0.057 [599-641]T  0.00018 [644-681]T 
 90 [684-725]T  7 [726-763]T   
Parentno parent
ChildrenIPR019781
Found inIPR000009IPR000664IPR001632IPR004083IPR009146IPR011046IPR013577IPR013905IPR015505IPR015943IPR016346IPR016391IPR016453IPR016902IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422IPR017986
ContainsIPR019775
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR001841
Domain
Zinc finger, RING-type
SMARTSM00184no description
 8.9e-07 [6-50]T    
PROFILEPS50089ZF_RING_2
 11.958 [6-51]T    
Parentno parent
Childrenno children
Found inIPR001237IPR004162IPR004575IPR004580IPR007954IPR011364IPR012227IPR015458IPR016390IPR016398IPR016495IPR016528IPR016569IPR016818IPR016902IPR017066IPR017335IPR017375IPR018957IPR019162
ContainsIPR017907
GO termsMolecular Function: protein binding (GO:0005515)
Molecular Function: zinc ion binding (GO:0008270)
InterPro
IPR011009
Domain
Protein kinase-like domain
SUPERFAMILYSSF56112Protein kinase-like (PK-like)
 8.7e-06 [178-456]T    
Parentno parent
ChildrenIPR000403IPR000719IPR002573IPR002575IPR004147IPR004166IPR015275IPR015897
Found inIPR000239IPR002291IPR002374IPR008290IPR008350IPR009136IPR009220IPR010232IPR012180IPR012234IPR015433IPR015515IPR015726IPR015751IPR015782IPR015785IPR016231IPR016232IPR016234IPR016235IPR016237IPR016240IPR016241IPR016242IPR016243IPR016246IPR016247IPR016248IPR016250IPR016251IPR016256IPR016257IPR017090IPR017164IPR017184IPR017190IPR017239IPR017322IPR017348IPR017400IPR017406IPR017407IPR017419IPR017424IPR017425IPR020446IPR020455IPR020461IPR020675IPR020676IPR020677IPR020679IPR020682IPR020684IPR020693IPR020775IPR020776IPR020777IPR021160
ContainsIPR001824IPR002011IPR003527IPR003605IPR007521IPR008266IPR008271IPR017441IPR018935IPR018936
GO termsnone
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SUPERFAMILYSSF50978WD40 repeat-like
 4.4e-48 [511-805]T    
ParentIPR015943
ChildrenIPR017986
Found inIPR000009IPR000664IPR004083IPR009146IPR011387IPR013863IPR015048IPR015049IPR015505IPR016346IPR016391IPR016453IPR016528IPR016616IPR016902IPR017149IPR017169IPR017217IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR013577IPR018067IPR019417IPR019775IPR019781IPR019782IPR020389
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR011115
Domain
SecA DEAD-like, N-terminal
PFAMPF07517SecA_DEAD
 1.7e-107 [822-1197]T    
SMARTSM00957no description
 3e-230 [814-1198]T    
Parentno parent
Childrenno children
Found inIPR000185IPR022490
ContainsIPR011130
GO termsMolecular Function: ATP binding (GO:0005524)
Cellular Component: membrane (GO:0016020)
Biological Process: protein import (GO:0017038)
InterPro
IPR011116
Domain
SecA Wing/Scaffold
GENE3DG3DSA:1.10.3060.10no description
 2.4e-29 [1717-1791]T    
PFAMPF07516SecA_SW
 3e-59 [1517-1793]T    
SUPERFAMILYSSF81886Helical scaffold and wing domains of SecA
 2.8e-39 [1520-1794]T    
Parentno parent
Childrenno children
Found inIPR000185IPR022490
Containsno entries
GO termsCellular Component: membrane (GO:0016020)
Biological Process: protein import (GO:0017038)
InterPro
IPR011130
Domain
SecA preprotein, cross-linking domain
GENE3DG3DSA:3.90.1440.10no description
 6.5e-41 [1046-1163]T    
PFAMPF01043SecA_PP_bind
 1.1e-30 [1045-1154]T    
SMART
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science