InterPro Scan Result: AT1G43190.2

SEQUENCE: AT1G43190.2 CRC64: CB08B41B0A370CA0 LENGTH: 432 aa
InterPro
IPR000504
Domain
RNA recognition motif domain
PF00076[10-59]T 3e-06 PF00076 RRM_1[247-312]T 4.8e-06 PF00076 RRM_1[360-422]T 1.1e-07 PF00076 RRM_1RRM_1
SM00360[7-76]T 2.9e-09 SM00360 no description[102-171]T 0.87 SM00360 no description[246-315]T 6.4e-12 SM00360 no description[356-425]T 3.7e-09 SM00360 no descriptionno description
PS50102[6-80]T 11.315 PS50102 RRM[245-319]T 13.004 PS50102 RRM[355-429]T 11.708 PS50102 RRMRRM
InterPro
IPR006536
Family
HnRNP-L/PTB/hephaestus splicing factor
TIGR01649[4-431]T 4.1e-108 TIGR01649 hnRNP-L_PTB: hnRNP-L/PTB/hephaestus splichnRNP-L_PTB: hnRNP-L/PTB/hephaestus splic
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[3-82]T 1.1e-14 G3DSA:3.30.70.330 no description[101-199]T 4.8e-22 G3DSA:3.30.70.330 no description[242-340]T 2.4e-18 G3DSA:3.30.70.330 no description[352-428]T 1.1e-13 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
coil[389-410]? NA coil coiled-coilcoiled-coil
PTHR11546[5-432]T 1.3e-290 PTHR11546 FAMILY NOT NAMEDFAMILY NOT NAMED
PTHR11546:SF15[5-432]T 1.3e-290 PTHR11546:SF15 SUBFAMILY NOT NAMEDSUBFAMILY NOT NAMED
SSF54928[3-85]T 5.9e-18 SSF54928 RNA-binding domain, RBD[94-201]T 7.1e-16 SSF54928 RNA-binding domain, RBD[243-428]T 8.4e-22 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: AT1G43190.2 CRC64: CB08B41B0A370CA0 LENGTH: 432 aa
InterPro
IPR000504
Domain
RNA recognition motif domain
PFAMPF00076RRM_1
 3e-06 [10-59]T  4.8e-06 [247-312]T  1.1e-07 [360-422]T  
SMARTSM00360no description
 2.9e-09 [7-76]T  0.87 [102-171]T  6.4e-12 [246-315]T  3.7e-09 [356-425]T 
PROFILEPS50102RRM
 11.315 [6-80]T  13.004 [245-319]T  11.708 [355-429]T  
Parentno parent
ChildrenIPR003954
Found inIPR002343IPR002344IPR006509IPR006515IPR006529IPR006532IPR006535IPR006536IPR006546IPR006548IPR008111IPR009145IPR011400IPR012677IPR016304IPR016967IPR017111IPR017325IPR017334IPR017347
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
InterPro
IPR006536
Family
HnRNP-L/PTB/hephaestus splicing factor
TIGRFAMsTIGR01649hnRNP-L_PTB: hnRNP-L/PTB/hephaestus splic
 4.1e-108 [4-431]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR000504
GO termsMolecular Function: RNA binding (GO:0003723)
Cellular Component: nucleus (GO:0005634)
Biological Process: mRNA processing (GO:0006397)
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
GENE3DG3DSA:3.30.70.330no description
 1.1e-14 [3-82]T  4.8e-22 [101-199]T  2.4e-18 [242-340]T  1.1e-13 [352-428]T 
Parentno parent
ChildrenIPR012678IPR014789IPR015245
Found inIPR000427IPR005120IPR006509IPR009021IPR013025IPR016304IPR016967IPR017325IPR017334IPR017347IPR019985
ContainsIPR000504IPR001014IPR014886IPR018098
GO termsMolecular Function: nucleotide binding (GO:0000166)
noIPR
unintegrated
unintegrated
COILcoilcoiled-coil
 NA [389-410]?    
PANTHERPTHR11546FAMILY NOT NAMED
 1.3e-290 [5-432]T    
PANTHERPTHR11546:SF15SUBFAMILY NOT NAMED
 1.3e-290 [5-432]T    
SUPERFAMILYSSF54928RNA-binding domain, RBD
 8.4e-22 [243-428]T  5.9e-18 [3-85]T  7.1e-16 [94-201]T  
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone