cDNAs
Lines
Phenotype search
Genome Map
InterPro Scan Result: AT2G05170.1
SEQUENCE:
AT2G05170.1
CRC64:
75C906999A2E3B57
LENGTH:
932 aa
InterPro
IPR001841
Domain
Zinc finger, RING-type
SM00184
RING
PS50089
ZF_RING_2
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978
WD40_like
InterPro
IPR011990
Domain
Tetratricopeptide-like helical
G3DSA:1.25.40.10
TPR-like_helical
InterPro
IPR013083
Domain
Zinc finger, RING/FYVE/PHD-type
G3DSA:3.30.40.10
Znf_RING/FYVE/PHD
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10
WD40/YVTN_repeat-like
InterPro
IPR016528
Family
Vacuolar protein sorting-associated protein 11
PIRSF007860
VPS11
noIPR
unintegrated
unintegrated
PTHR23323
PTHR23323
PTHR23323:SF24
PTHR23323:SF24
PF00637
Clathrin
PF12451
VPS11_C
SSF57850
SSF57850
SEQUENCE:
AT2G05170.1
CRC64:
75C906999A2E3B57
LENGTH:
932 aa
InterPro
IPR001841
Domain
Zinc finger, RING-type
SMART
SM00184
RING
0.04300000526153366 [842-877]T
PROFILE
PS50089
ZF_RING_2
0.0 [842-877]T
Parent
no parent
Children
no children
Found in
IPR001237
IPR004162
IPR004575
IPR004580
IPR007954
IPR011364
IPR012227
IPR015458
IPR016390
IPR016398
IPR016495
IPR016528
IPR016569
IPR016818
IPR016902
IPR017066
IPR017335
IPR017375
IPR018957
IPR019162
Contains
IPR017907
GO terms
Molecular Function: protein binding (
GO:0005515
)
Molecular Function: zinc ion binding (
GO:0008270
)
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SUPERFAMILY
SSF50978
WD40_like
5.099998824399772E-7 [25-218]T
Parent
IPR015943
Children
IPR017986
Found in
IPR000009
IPR000664
IPR004083
IPR009146
IPR011387
IPR013863
IPR015048
IPR015049
IPR015505
IPR016346
IPR016391
IPR016453
IPR016528
IPR016616
IPR016902
IPR017149
IPR017169
IPR017217
IPR017233
IPR017251
IPR017252
IPR017383
IPR017399
IPR017422
Contains
IPR001632
IPR001680
IPR013577
IPR018067
IPR019417
IPR019775
IPR019781
IPR019782
IPR020389
GO terms
Molecular Function: protein binding (
GO:0005515
)
InterPro
IPR011990
Domain
Tetratricopeptide-like helical
GENE3D
G3DSA:1.25.40.10
TPR-like_helical
3.500000000000003E-6 [395-542]T
Parent
no parent
Children
no children
Found in
IPR000744
IPR001237
IPR002151
IPR003921
IPR005158
IPR005254
IPR005415
IPR005687
IPR006822
IPR009211
IPR010547
IPR011236
IPR013360
IPR013940
IPR014162
IPR014266
IPR014460
IPR014562
IPR014596
IPR016341
IPR016379
IPR016543
IPR016684
IPR016931
IPR016982
IPR017400
IPR017689
IPR021183
Contains
IPR001440
IPR003107
IPR006597
IPR011716
IPR011717
IPR013026
IPR013105
IPR015792
IPR019544
IPR019568
GO terms
Molecular Function: binding (
GO:0005488
)
InterPro
IPR013083
Domain
Zinc finger, RING/FYVE/PHD-type
GENE3D
G3DSA:3.30.40.10
Znf_RING/FYVE/PHD
1.9E-4 [839-881]T
Parent
no parent
Children
IPR003613
IPR011011
IPR018957
IPR022723
Found in
IPR001237
IPR002853
IPR004575
IPR004580
IPR012227
IPR016390
IPR016398
IPR016818
IPR017335
Contains
IPR001965
IPR003315
IPR017455
IPR017907
IPR019786
GO terms
none
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
GENE3D
G3DSA:2.130.10.10
WD40/YVTN_repeat-like
2.300000000000001E-6 [30-114]T
2.300000000000001E-6 [159-249]T
Parent
no parent
Children
IPR001627
IPR011045
IPR011046
Found in
IPR004083
IPR008311
IPR008826
IPR011400
IPR012393
IPR013476
IPR016346
IPR016391
IPR016453
IPR017169
IPR017217
IPR017233
IPR017251
IPR017252
IPR017383
IPR017399
IPR017422
Contains
IPR001632
IPR001680
IPR011044
IPR011964
IPR013577
IPR013979
IPR018067
IPR019417
IPR019775
IPR019781
IPR019782
IPR020389
GO terms
Molecular Function: protein binding (
GO:0005515
)
InterPro
IPR016528
Family
Vacuolar protein sorting-associated protein 11
PIR
PIRSF007860
VPS11
0.0 [1-932]T
Parent
no parent
Children
no children
Found in
no entries
Contains
IPR001841
IPR011046
IPR016024
GO terms
none
noIPR
unintegrated
unintegrated
PANTHER
PTHR23323
PTHR23323
0.0 [1-931]T
PANTHER
PTHR23323:SF24
PTHR23323:SF24
0.0 [1-931]T
PFAM
PF00637
Clathrin
9.100000000000008E-12 [393-515]T
PFAM
PF12451
VPS11_C
6.000000000000005E-14 [878-926]T
SUPERFAMILY
SSF57850
SSF57850
2.5999994671899463E-6 [834-890]T
Parent
no parent
Children
no children
Found in
no entries
Contains
no entries
GO terms
none