InterPro Scan Result: AT3G02060.1

SEQUENCE: AT3G02060.1 CRC64: 4718AF5231018B82 LENGTH: 823 aa
InterPro
IPR001650
Domain
Helicase, C-terminal
PF00271[505-577]T 9.1e-16 PF00271 Helicase_CHelicase_C
SM00490[494-578]T 4.4e-21 SM00490 no descriptionno description
PS51194[465-622]T 16.723 PS51194 HELICASE_CTERHELICASE_CTER
InterPro
IPR003711
Domain
Transcription factor CarD
PF02559[144-242]T 2.2e-16 PF02559 CarD_TRCFCarD_TRCF
InterPro
IPR005118
Domain
Transcription-repair-coupling factor domain
PF03461[673-763]T 9.7e-12 PF03461 TRCFTRCF
InterPro
IPR011545
Domain
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PF00270[272-430]T 1.1e-17 PF00270 DEADDEAD
InterPro
IPR014001
Domain
DEAD-like helicase
SM00487[266-458]T 4.7e-30 SM00487 no descriptionno description
PS51192[285-447]T 21.455 PS51192 HELICASE_ATP_BIND_1HELICASE_ATP_BIND_1
noIPR
unintegrated
unintegrated
G3DSA:3.40.50.300[264-418]T 1.7e-23 G3DSA:3.40.50.300 no description[463-611]T 2.3e-29 G3DSA:3.40.50.300 no descriptionno description
PTHR24031[269-813]T 2.6e-160 PTHR24031 FAMILY NOT NAMEDFAMILY NOT NAMED
PTHR24031:SF85[269-813]T 2.6e-160 PTHR24031:SF85 SUBFAMILY NOT NAMEDSUBFAMILY NOT NAMED
seg[21-57]? NA seg seg[697-704]? NA seg seg[792-803]? NA seg segseg
SSF141259[131-214]T 7e-10 SSF141259 CarD-likeCarD-like
SSF143517[658-818]T 1.4e-09 SSF143517 TRCF domain-likeTRCF domain-like
SSF52540[318-601]T 3.4e-61 SSF52540 P-loop containing nucleoside triphosphate hydrolasesP-loop containing nucleoside triphosphate hydrolases
SEQUENCE: AT3G02060.1 CRC64: 4718AF5231018B82 LENGTH: 823 aa
InterPro
IPR001650
Domain
Helicase, C-terminal
PFAMPF00271Helicase_C
 9.1e-16 [505-577]T    
SMARTSM00490no description
 4.4e-21 [494-578]T    
PROFILEPS51194HELICASE_CTER
 16.723 [465-622]T    
Parentno parent
Childrenno children
Found inIPR000185IPR004576IPR004589IPR004609IPR004807IPR005259IPR006293IPR006474IPR010222IPR010225IPR013444IPR014018IPR014412IPR016438IPR017170IPR017575IPR022307
Containsno entries
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: helicase activity (GO:0004386)
Molecular Function: ATP binding (GO:0005524)
InterPro
IPR003711
Domain
Transcription factor CarD
PFAMPF02559CarD_TRCF
 2.2e-16 [144-242]T    
Parentno parent
Childrenno children
Found inIPR004576
Containsno entries
GO termsMolecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
InterPro
IPR005118
Domain
Transcription-repair-coupling factor domain
PFAMPF03461TRCF
 9.7e-12 [673-763]T    
Parentno parent
Childrenno children
Found inIPR004576
Containsno entries
GO termsMolecular Function: damaged DNA binding (GO:0003684)
Molecular Function: helicase activity (GO:0004386)
Molecular Function: ATP binding (GO:0005524)
Biological Process: DNA repair (GO:0006281)
InterPro
IPR011545
Domain
DNA/RNA helicase, DEAD/DEAH box type, N-terminal
PFAMPF00270DEAD
 1.1e-17 [272-430]T    
ParentIPR014001
Childrenno children
Found inIPR004576IPR004589IPR004609IPR005259IPR005736IPR006293IPR016438IPR017170IPR022307
ContainsIPR000629
GO termsMolecular Function: nucleic acid binding (GO:0003676)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: ATP-dependent helicase activity (GO:0008026)
InterPro
IPR014001
Domain
DEAD-like helicase
SMARTSM00487no description
 4.7e-30 [266-458]T    
PROFILEPS51192HELICASE_ATP_BIND_1
 21.455 [285-447]T    
Parentno parent
ChildrenIPR006935IPR011492IPR011545
Found inIPR000330IPR003450IPR004473IPR004483IPR004589IPR004807IPR006293IPR006310IPR006474IPR010222IPR010225IPR017548IPR017575IPR022307
ContainsIPR000629IPR002464IPR010614IPR014013
GO termsnone
noIPR
unintegrated
unintegrated
GENE3DG3DSA:3.40.50.300no description
 1.7e-23 [264-418]T  2.3e-29 [463-611]T   
PANTHERPTHR24031FAMILY NOT NAMED
 2.6e-160 [269-813]T    
PANTHERPTHR24031:SF85SUBFAMILY NOT NAMED
 2.6e-160 [269-813]T    
SEGsegseg
 NA [21-57]?  NA [697-704]?  NA [792-803]?  
SUPERFAMILYSSF141259CarD-like
 7e-10 [131-214]T    
SUPERFAMILYSSF143517TRCF domain-like
 1.4e-09 [658-818]T    
SUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolases
 3.4e-61 [318-601]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone