InterPro Scan Result: AT5G49430.1

SEQUENCE: AT5G49430.1 CRC64: A28E26967985A58B LENGTH: 1677 aa
InterPro
IPR001487
Domain
Bromodomain
G3DSA:1.20.920.10[1568-1674]T 1.4e-10 G3DSA:1.20.920.10 no descriptionno description
PF00439[1603-1660]T 8.2e-10 PF00439 BromodomainBromodomain
SM00297[1571-1676]T 0.0038 SM00297 no descriptionno description
PS50014[1610-1660]T 9.642 PS50014 BROMODOMAIN_2BROMODOMAIN_2
SSF47370[1568-1674]T 2e-12 SSF47370 BromodomainBromodomain
InterPro
IPR001680
Repeat
WD40 repeat
SM00320[234-273]T 3e-07 SM00320 no description[276-315]T 2.2e-08 SM00320 no description[318-360]T 4e-10 SM00320 no description[382-421]T 0.081 SM00320 no description[436-501]T 9.6 SM00320 no description[534-572]T 1.8 SM00320 no description[575-615]T 3.8e-05 SM00320 no descriptionno description
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SSF50978[233-661]T 1.2e-62 SSF50978 WD40 repeat-likeWD40 repeat-like
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
G3DSA:2.130.10.10[235-493]T 1.3e-50 G3DSA:2.130.10.10 no description[494-662]T 2.3e-21 G3DSA:2.130.10.10 no descriptionno description
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PS50294[241-430]T 32.008 PS50294 WD_REPEATS_REGION[540-624]T 13.106 PS50294 WD_REPEATS_REGIONWD_REPEATS_REGION
InterPro
IPR019775
Conserved_site
WD40 repeat, conserved site
PS00678[347-361]T NA PS00678 WD_REPEATS_1[559-573]T NA PS00678 WD_REPEATS_1[602-616]T NA PS00678 WD_REPEATS_1WD_REPEATS_1
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PF00400[238-273]T 5e-07 PF00400 WD40[279-314]T 1.9e-08 PF00400 WD40[320-360]T 3.3e-11 PF00400 WD40[394-421]T 0.0033 PF00400 WD40[442-500]T 0.043 PF00400 WD40[545-572]T 0.69 PF00400 WD40[577-615]T 0.0076 PF00400 WD40WD40
InterPro
IPR019782
Repeat
WD40 repeat 2
PS50082[241-282]T 14.118 PS50082 WD_REPEATS_2[283-324]T 12.179 PS50082 WD_REPEATS_2[325-369]T 13.282 PS50082 WD_REPEATS_2WD_REPEATS_2
noIPR
unintegrated
unintegrated
PTHR16266[24-1136]T 0 PTHR16266 FAMILY NOT NAMEDFAMILY NOT NAMED
PTHR16266:SF18[24-1136]T 0 PTHR16266:SF18 SUBFAMILY NOT NAMEDSUBFAMILY NOT NAMED
seg[71-87]? NA seg seg[159-171]? NA seg seg[296-307]? NA seg seg[523-539]? NA seg seg[756-769]? NA seg seg[808-826]? NA seg seg[832-841]? NA seg seg[868-895]? NA seg seg[911-942]? NA seg seg[1505-1520]? NA seg segseg
SSF117289[396-500]T 2.1e-06 SSF117289 Nucleoporin domainNucleoporin domain
SEQUENCE: AT5G49430.1 CRC64: A28E26967985A58B LENGTH: 1677 aa
InterPro
IPR001487
Domain
Bromodomain
GENE3DG3DSA:1.20.920.10no description
 1.4e-10 [1568-1674]T    
PFAMPF00439Bromodomain
 8.2e-10 [1603-1660]T    
SMARTSM00297no description
 0.0038 [1571-1676]T    
PROFILEPS50014BROMODOMAIN_2
 9.642 [1610-1660]T    
SUPERFAMILYSSF47370Bromodomain
 2e-12 [1568-1674]T    
Parentno parent
Childrenno children
Found inIPR011177IPR016376IPR017413
ContainsIPR018359
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR001680
Repeat
WD40 repeat
SMARTSM00320no description
 3e-07 [234-273]T  2.2e-08 [276-315]T  4e-10 [318-360]T  0.081 [382-421]T 
 9.6 [436-501]T  1.8 [534-572]T  3.8e-05 [575-615]T  
Parentno parent
ChildrenIPR019781
Found inIPR000009IPR000664IPR001632IPR004083IPR009146IPR011046IPR013577IPR013905IPR015505IPR015943IPR016346IPR016391IPR016453IPR016902IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422IPR017986
ContainsIPR019775
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR011046
Domain
WD40 repeat-like-containing domain
SUPERFAMILYSSF50978WD40 repeat-like
 1.2e-62 [233-661]T    
ParentIPR015943
ChildrenIPR017986
Found inIPR000009IPR000664IPR004083IPR009146IPR011387IPR013863IPR015048IPR015049IPR015505IPR016346IPR016391IPR016453IPR016528IPR016616IPR016902IPR017149IPR017169IPR017217IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR013577IPR018067IPR019417IPR019775IPR019781IPR019782IPR020389
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR015943
Domain
WD40/YVTN repeat-like-containing domain
GENE3DG3DSA:2.130.10.10no description
 1.3e-50 [235-493]T  2.3e-21 [494-662]T   
Parentno parent
ChildrenIPR001627IPR011045IPR011046
Found inIPR004083IPR008311IPR008826IPR011400IPR012393IPR013476IPR016346IPR016391IPR016453IPR017169IPR017217IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR011044IPR011964IPR013577IPR013979IPR018067IPR019417IPR019775IPR019781IPR019782IPR020389
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR017986
Domain
WD40-repeat-containing domain
PROFILEPS50294WD_REPEATS_REGION
 32.008 [241-430]T  13.106 [540-624]T   
ParentIPR011046
Childrenno children
Found inIPR004083IPR009146IPR015505IPR016346IPR016391IPR016453IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422
ContainsIPR001632IPR001680IPR019775IPR019781IPR019782
GO termsMolecular Function: protein binding (GO:0005515)
InterPro
IPR019775
Conserved_site
WD40 repeat, conserved site
PROSITEPS00678WD_REPEATS_1
 NA [347-361]T  NA [559-573]T  NA [602-616]T  
Parentno parent
Childrenno children
Found inIPR000009IPR000664IPR001632IPR001680IPR011046IPR015505IPR015943IPR016346IPR016391IPR017149IPR017251IPR017252IPR017422IPR017986IPR019781IPR019782
Containsno entries
GO termsnone
InterPro
IPR019781
Repeat
WD40 repeat, subgroup
PFAMPF00400WD40
 5e-07 [238-273]T  1.9e-08 [279-314]T  3.3e-11 [320-360]T  0.0033 [394-421]T 
 0.043 [442-500]T  0.69 [545-572]T  0.0076 [577-615]T  
ParentIPR001680
ChildrenIPR019782
Found inIPR000009IPR000664IPR001632IPR004083IPR009146IPR011046IPR015505IPR015943IPR016346IPR016391IPR016453IPR016902IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422IPR017986
ContainsIPR019775
GO termsnone
InterPro
IPR019782
Repeat
WD40 repeat 2
PROFILEPS50082WD_REPEATS_2
 14.118 [241-282]T  12.179 [283-324]T  13.282 [325-369]T  
ParentIPR019781
Childrenno children
Found inIPR000664IPR001632IPR009146IPR011046IPR015505IPR015943IPR016346IPR016391IPR016453IPR017149IPR017233IPR017251IPR017252IPR017383IPR017399IPR017422IPR017986
ContainsIPR019775
GO termsnone
noIPR
unintegrated
unintegrated
PANTHERPTHR16266FAMILY NOT NAMED
 0 [24-1136]T    
PANTHERPTHR16266:SF18SUBFAMILY NOT NAMED
 0 [24-1136]T    
SEGsegseg
 NA [71-87]?  NA [159-171]?  NA [296-307]?  NA [523-539]? 
 NA [756-769]?  NA [808-826]?  NA [832-841]?  NA [868-895]? 
 NA [911-942]?  NA [1505-1520]?   
SUPERFAMILYSSF117289Nucleoporin domain
 2.1e-06 [396-500]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone