InterPro Scan Result: AT5G60040.1

SEQUENCE: AT5G60040.1 CRC64: 12B86B2A04751C4E LENGTH: 1376 aa
InterPro
IPR000722
Domain
RNA polymerase, alpha subunit
PF00623[359-524]T 2e-69 PF00623 RNA_pol_Rpb1_2RNA_pol_Rpb1_2
InterPro
IPR006592
Domain
RNA polymerase, N-terminal
SM00663[251-553]T 2.3e-163 SM00663 no descriptionno description
InterPro
IPR007066
Domain
RNA polymerase Rpb1, domain 3
PF04983[528-704]T 1.5e-32 PF04983 RNA_pol_Rpb1_3RNA_pol_Rpb1_3
InterPro
IPR007080
Domain
RNA polymerase Rpb1, domain 1
PF04997[22-357]T 8.8e-70 PF04997 RNA_pol_Rpb1_1RNA_pol_Rpb1_1
InterPro
IPR007081
Domain
RNA polymerase Rpb1, domain 5
PF04998[842-1312]T 6.8e-102 PF04998 RNA_pol_Rpb1_5RNA_pol_Rpb1_5
InterPro
IPR007083
Domain
RNA polymerase Rpb1, domain 4
PF05000[729-835]T 2e-29 PF05000 RNA_pol_Rpb1_4RNA_pol_Rpb1_4
InterPro
IPR015700
Family
DNA-directed RNA polymerase III largest subunit
PTHR19376:SF15[9-1371]T 0 PTHR19376:SF15 DNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNITDNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNIT
noIPR
unintegrated
unintegrated
PTHR19376[9-1371]T 0 PTHR19376 FAMILY NOT NAMEDFAMILY NOT NAMED
SSF64484[11-1364]T 0 SSF64484 beta and beta-prime subunits of DNA dependent RNA-polymerasebeta and beta-prime subunits of DNA dependent RNA-polymerase
SEQUENCE: AT5G60040.1 CRC64: 12B86B2A04751C4E LENGTH: 1376 aa
InterPro
IPR000722
Domain
RNA polymerase, alpha subunit
PFAMPF00623RNA_pol_Rpb1_2
 2e-69 [359-524]T    
Parentno parent
Childrenno children
Found inIPR006592IPR012754IPR012755IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR006592
Domain
RNA polymerase, N-terminal
SMARTSM00663no description
 2.3e-163 [251-553]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012755IPR012758IPR015699IPR015700
ContainsIPR000722
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007066
Domain
RNA polymerase Rpb1, domain 3
PFAMPF04983RNA_pol_Rpb1_3
 1.5e-32 [528-704]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012755IPR012756IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007080
Domain
RNA polymerase Rpb1, domain 1
PFAMPF04997RNA_pol_Rpb1_1
 8.8e-70 [22-357]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012755IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007081
Domain
RNA polymerase Rpb1, domain 5
PFAMPF04998RNA_pol_Rpb1_5
 6.8e-102 [842-1312]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012756IPR012757IPR015699IPR015700
ContainsIPR007073IPR007075
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR007083
Domain
RNA polymerase Rpb1, domain 4
PFAMPF05000RNA_pol_Rpb1_4
 2e-29 [729-835]T    
Parentno parent
Childrenno children
Found inIPR012754IPR012756IPR012758IPR015699IPR015700
Containsno entries
GO termsMolecular Function: DNA binding (GO:0003677)
Molecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Biological Process: transcription (GO:0006350)
InterPro
IPR015700
Family
DNA-directed RNA polymerase III largest subunit
PANTHERPTHR19376:SF15DNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNIT
 0 [9-1371]T    
Parentno parent
Childrenno children
Found inno entries
ContainsIPR000722IPR006592IPR007066IPR007080IPR007081IPR007083
GO termsMolecular Function: DNA-directed RNA polymerase activity (GO:0003899)
Cellular Component: nucleus (GO:0005634)
Biological Process: transcription (GO:0006350)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: ribonucleoside binding (GO:0032549)
noIPR
unintegrated
unintegrated
PANTHERPTHR19376FAMILY NOT NAMED
 0 [9-1371]T    
SUPERFAMILYSSF64484beta and beta-prime subunits of DNA dependent RNA-polymerase
 0 [11-1364]T    
Parentno parent
Childrenno children
Found inno entries
Containsno entries
GO termsnone