InterPro Scan Result: J023067P18

SEQUENCE: Sequence_1_1_ORF2 CRC64: ED650E5066449096 LENGTH: 151 aa
InterPro
IPR006110
Family
RNA polymerase Rpb6
PF01192[66-121]T 2e-23 PF01192 RNA_pol_Rpb6RNA_pol_Rpb6
SSF63562[10-142]T 9.9e-50 SSF63562 RPB6/omega subunit-likeRPB6/omega subunit-like
InterPro
IPR006111
Family
DNA-directed RNA polymerase, 14-18kDa subunit
PTHR10773[10-142]T 1.7e-70 PTHR10773 DNA-DIRECTED RNA POLYMERASE SUBUNIT RPB6DNA-DIRECTED RNA POLYMERASE SUBUNIT RPB6
InterPro
IPR012293
Domain
RNA polymerase subunit, RPB6/omega
G3DSA:3.90.940.10[16-142]T 1.6e-44 G3DSA:3.90.940.10 no descriptionno description
InterPro
IPR020708
Conserved_site
DNA-directed RNA polymerase, 14-18kDa subunit, conserved site
PS01111[73-87]T NA PS01111 RNA_POL_K_14KDRNA_POL_K_14KD
InterPro
IPR020709
Domain
DNA-directed RNA polymerase, subunit K, subgroup
MF_00192[70-125]T 18.637 MF_00192 RPOK_MF_00192RPOK_MF_00192
noIPR
unintegrated
unintegrated
PTHR10773:SF8[10-142]T 1.7e-70 PTHR10773:SF8 DNA-DIRECTED RNA POLYMERASE SUBUNIT RPB6DNA-DIRECTED RNA POLYMERASE SUBUNIT RPB6
seg[5-48]? NA seg segseg
SEQUENCE: Sequence_1_2_ORF1 CRC64: 7C3C1534847993C4 LENGTH: 74 aa
noIPR
unintegrated
unintegrated
seg[37-45]? NA seg seg[53-65]? NA seg segseg
SEQUENCE: Sequence_1_2_ORF2 CRC64: 704D89CE73082FB9 LENGTH: 55 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF2 CRC64: C5A5BC02A349AB05 LENGTH: 56 aa
No hits reported.
SEQUENCE: Sequence_1_4_ORF3 CRC64: 04B773465C342B73 LENGTH: 55 aa
noIPR
unintegrated
unintegrated
seg[16-35]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF4 CRC64: 323A0656AEF5BDBA LENGTH: 64 aa
noIPR
unintegrated
unintegrated
seg[6-16]? NA seg seg[49-57]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF2 CRC64: FCA7B5CB39A753F9 LENGTH: 60 aa
No hits reported.
SEQUENCE: Sequence_1_5_ORF3 CRC64: 9B7BABA4C6295F7F LENGTH: 118 aa
noIPR
unintegrated
unintegrated
seg[39-48]? NA seg seg[54-68]? NA seg seg[70-97]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF2 CRC64: C8524B08DAC6303F LENGTH: 59 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF3 CRC64: 43EFF925044648A1 LENGTH: 75 aa
No hits reported.
SEQUENCE: Sequence_1_6_ORF4 CRC64: 42FD0D2DF537BB43 LENGTH: 66 aa
No hits reported.
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science