InterPro Scan Result: J033128E13

SEQUENCE: Sequence_1_1_ORF2 CRC64: B3829112FF65AA64 LENGTH: 84 aa
noIPR
unintegrated
unintegrated
seg[2-35]? NA seg seg[37-66]? NA seg segseg
SEQUENCE: Sequence_1_1_ORF3 CRC64: 7DFE452CE718E286 LENGTH: 61 aa
No hits reported.
SEQUENCE: Sequence_1_2_ORF2 CRC64: 231297C9F1471ACF LENGTH: 237 aa
InterPro
IPR000783
Domain
RNA polymerase, subunit H/Rpb5 C-terminal
PD005155[171-236]T 2e-31 PD005155 Q5VQW7_ORYSA_Q5VQW7;Q5VQW7_ORYSA_Q5VQW7;
G3DSA:3.90.940.20[165-237]T 3.1e-28 G3DSA:3.90.940.20 no descriptionno description
PF01191[164-237]T 7.2e-38 PF01191 RNA_pol_Rpb5_CRNA_pol_Rpb5_C
SSF55287[166-237]T 1.2e-31 SSF55287 RPB5-like RNA polymerase subunitRPB5-like RNA polymerase subunit
InterPro
IPR005571
Domain
RNA polymerase, Rpb5, N-terminal
G3DSA:3.40.1340.10[34-164]T 2.4e-39 G3DSA:3.40.1340.10 no descriptionno description
PF03871[36-122]T 2.1e-27 PF03871 RNA_pol_Rpb5_NRNA_pol_Rpb5_N
SSF53036[35-165]T 1.8e-39 SSF53036 Eukaryotic RPB5 N-terminal domainEukaryotic RPB5 N-terminal domain
InterPro
IPR014381
Family
DNA-directed RNA polymerase, RPB5 subunit
PIRSF000747[6-237]T 2.5e-112 PIRSF000747 DNA-directed RNA polymerase, RPB5 subunitDNA-directed RNA polymerase, RPB5 subunit
InterPro
IPR020608
Conserved_site
RNA polymerase, subunit H/Rpb5, conserved site
PS01110[169-182]T NA PS01110 RNA_POL_H_23KDRNA_POL_H_23KD
noIPR
unintegrated
unintegrated
PTHR10535[34-237]T 1.1e-85 PTHR10535 DNA-DIRECTED RNA POLYMERASE IIDNA-DIRECTED RNA POLYMERASE II
SEQUENCE: Sequence_1_3_ORF2 CRC64: D5A749A1B59D0547 LENGTH: 61 aa
noIPR
unintegrated
unintegrated
seg[9-49]? NA seg segseg
SEQUENCE: Sequence_1_4_ORF2 CRC64: AD894CB5AC9CA24C LENGTH: 145 aa
noIPR
unintegrated
unintegrated
seg[84-103]? NA seg segseg
SEQUENCE: Sequence_1_5_ORF1 CRC64: 3BEDABFE19CD10B2 LENGTH: 124 aa
No hits reported.
SEQUENCE: Sequence_1_5_ORF2 CRC64: 76063A9467A9E881 LENGTH: 125 aa
noIPR
unintegrated
unintegrated
seg[45-81]? NA seg seg[89-119]? NA seg segseg
SEQUENCE: Sequence_1_6_ORF2 CRC64: 42ACD04734092C6C LENGTH: 66 aa
noIPR
unintegrated
unintegrated
seg[1-28]? NA seg seg[32-63]? NA seg segseg
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