InterPro Scan Result: RAFL05-01-D12

SEQUENCE: RAFL05-01-D12_1_ORF1 CRC64: DF4323E257C01E26 LENGTH: 394 aa
InterPro
IPR000743
Family
Glycoside hydrolase, family 28
PF00295[10-92]T 2.2e-11 PF00295 Glyco_hydro_28[129-346]T 8.1e-70 PF00295 Glyco_hydro_28Glyco_hydro_28
PS00502[218-231]T NA PS00502 POLYGALACTURONASEPOLYGALACTURONASE
InterPro
IPR006626
Repeat
Parallel beta-helix repeat
SM00710[161-187]T 3.8e+02 SM00710 no description[188-209]T 2.2e+03 SM00710 no description[211-231]T 6.8e+03 SM00710 no description[241-262]T 29 SM00710 no descriptionno description
InterPro
IPR011050
Domain
Pectin lyase fold/virulence factor
SSF51126[1-382]T 8e-90 SSF51126 Pectin lyase-likePectin lyase-like
InterPro
IPR012334
Domain
Pectin lyase fold
G3DSA:2.160.20.10[1-382]T 5.5e-106 G3DSA:2.160.20.10 no descriptionno description
SEQUENCE: RAFL05-01-D12_3_ORF2 CRC64: 202FB6CE6B7EC0BC LENGTH: 63 aa
No hits reported.
SEQUENCE: RAFL05-01-D12_4_ORF2 CRC64: B1AE5A807D002B69 LENGTH: 65 aa
No hits reported.
SEQUENCE: RAFL05-01-D12_4_ORF3 CRC64: 1191F99687786387 LENGTH: 95 aa
noIPR
unintegrated
unintegrated
seg[13-26]? NA seg segseg
SEQUENCE: RAFL05-01-D12_4_ORF4 CRC64: CFB73AD5235D14C4 LENGTH: 72 aa
No hits reported.
SEQUENCE: RAFL05-01-D12_5_ORF2 CRC64: D4966BE8F366B329 LENGTH: 64 aa
noIPR
unintegrated
unintegrated
seg[28-41]? NA seg segseg
SEQUENCE: RAFL05-01-D12_6_ORF2 CRC64: 3EB19D1D1C548EF4 LENGTH: 53 aa
No hits reported.
SEQUENCE: RAFL05-01-D12_6_ORF3 CRC64: AA37CA42648D95F7 LENGTH: 116 aa
noIPR
unintegrated
unintegrated
seg[26-40]? NA seg segseg
Creative Commons License RIKEN Center for Sustainable Resource Science
Contact: RARGE developers <>
  • RIKEN
  • Plant Science Center
  • Center for Sustainable Resource Science