InterPro Scan Result: RAFL08-08-E04

SEQUENCE: RAFL08-08-E04_2_ORF2 CRC64: 1B725EF963BDAEEB LENGTH: 435 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
PF00076[208-282]T 7.5e-10 PF00076 RRM_1RRM_1
SM00360[207-292]T 3.1e-06 SM00360 no descriptionno description
PS50102[206-296]T 12.185 PS50102 RRMRRM
InterPro
IPR002344
Family
Lupus La protein
PR00302[123-140]T 2.8e-13 PR00302 LUPUSLA[149-164]T 2.8e-13 PR00302 LUPUSLA[180-193]T 2.8e-13 PR00302 LUPUSLA[258-276]T 2.8e-13 PR00302 LUPUSLALUPUSLA
InterPro
IPR006630
Domain
RNA-binding protein Lupus La
PF05383[120-179]T 3.7e-27 PF05383 LaLa
SM00715[114-194]T 1.7e-46 SM00715 no descriptionno description
PS50961[110-201]T 28.638 PS50961 HTH_LAHTH_LA
InterPro
IPR011991
Domain
Winged helix-turn-helix transcription repressor DNA-binding
G3DSA:1.10.10.10[107-198]T 4.2e-30 G3DSA:1.10.10.10 no descriptionno description
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[207-293]T 3.9e-08 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
PTHR22792[105-393]T 3.6e-92 PTHR22792 LUPUS LA PROTEIN-RELATEDLUPUS LA PROTEIN-RELATED
PTHR22792:SF3[105-393]T 3.6e-92 PTHR22792:SF3 RNA-BINDING PROTEINRNA-BINDING PROTEIN
seg[5-16]? NA seg seg[61-74]? NA seg seg[264-282]? NA seg seg[359-384]? NA seg segseg
SSF46785[107-198]T 1.3e-32 SSF46785 "Winged helix" DNA-binding domain
SSF54928[198-380]T 1.1e-12 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL08-08-E04_3_ORF1 CRC64: F97FDF46C1D34E04 LENGTH: 125 aa
noIPR
unintegrated
unintegrated
seg[100-115]? NA seg segseg
SEQUENCE: RAFL08-08-E04_3_ORF2 CRC64: F6CD8EAA7FBC3479 LENGTH: 68 aa
No hits reported.
SEQUENCE: RAFL08-08-E04_3_ORF3 CRC64: 3D3E4331C90D3CF3 LENGTH: 87 aa
noIPR
unintegrated
unintegrated
seg[57-76]? NA seg segseg
SEQUENCE: RAFL08-08-E04_3_ORF4 CRC64: 45BE1F5D3F526D0B LENGTH: 93 aa
noIPR
unintegrated
unintegrated
seg[19-30]? NA seg segseg
SEQUENCE: RAFL08-08-E04_4_ORF2 CRC64: D63615AA746CD705 LENGTH: 52 aa
No hits reported.
SEQUENCE: RAFL08-08-E04_4_ORF3 CRC64: 57793FA7A55F8224 LENGTH: 104 aa
noIPR
unintegrated
unintegrated
seg[40-58]? NA seg seg[68-78]? NA seg segseg
SEQUENCE: RAFL08-08-E04_4_ORF4 CRC64: 0A9C004AEA2AD87D LENGTH: 59 aa
noIPR
unintegrated
unintegrated
seg[23-36]? NA seg segseg
SEQUENCE: RAFL08-08-E04_5_ORF2 CRC64: 64DBCE5F58AF6700 LENGTH: 126 aa
noIPR
unintegrated
unintegrated
seg[82-95]? NA seg segseg
SEQUENCE: RAFL08-08-E04_5_ORF3 CRC64: 853B0088003F3A61 LENGTH: 95 aa
noIPR
unintegrated
unintegrated
seg[72-92]? NA seg segseg
SEQUENCE: RAFL08-08-E04_5_ORF4 CRC64: 649702DEFC43B350 LENGTH: 62 aa
noIPR
unintegrated
unintegrated
seg[51-62]? NA seg segseg
SEQUENCE: RAFL08-08-E04_6_ORF1 CRC64: 6E9FC737E4247593 LENGTH: 74 aa
noIPR
unintegrated
unintegrated
seg[20-31]? NA seg segseg
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