InterPro Scan Result: RAFL08-12-N11

SEQUENCE: RAFL08-12-N11_1_ORF1 CRC64: D73387F70B87DE0F LENGTH: 376 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
SM00360[275-353]T 9.5e-12 SM00360 no descriptionno description
PS50102[274-352]T 11.656 PS50102 RRMRRM
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[273-352]T 5.6e-19 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
seg[84-115]? NA seg seg[116-203]? NA seg seg[211-224]? NA seg segseg
SSF54928[236-354]T 8.5e-14 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL08-12-N11_2_ORF2 CRC64: A5E927BA24DC88C7 LENGTH: 191 aa
noIPR
unintegrated
unintegrated
seg[94-114]? NA seg segseg
SEQUENCE: RAFL08-12-N11_2_ORF3 CRC64: 17C41DA8B19D6DC0 LENGTH: 51 aa
noIPR
unintegrated
unintegrated
seg[24-48]? NA seg segseg
SEQUENCE: RAFL08-12-N11_2_ORF4 CRC64: 3E7E9891EEC2B995 LENGTH: 70 aa
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[3-69]T 2.4e-14 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
PTHR23139[5-65]T 2.3e-20 PTHR23139 RNA-BINDING PROTEINRNA-BINDING PROTEIN
PTHR23139:SF9[5-65]T 2.3e-20 PTHR23139:SF9 SPLICING FACTOR U2AF LARGE SUBUNITSPLICING FACTOR U2AF LARGE SUBUNIT
SSF54928[3-69]T 6.6e-06 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL08-12-N11_3_ORF2 CRC64: 4FBAC1EB02012640 LENGTH: 67 aa
noIPR
unintegrated
unintegrated
seg[26-34]? NA seg segseg
SEQUENCE: RAFL08-12-N11_3_ORF3 CRC64: 16A843CEBEDFBF8C LENGTH: 221 aa
InterPro
IPR000504
Domain
RNA recognition motif, RNP-1
PF00076[17-86]T 1.3e-17 PF00076 RRM_1RRM_1
SM00360[16-89]T 1.4e-20 SM00360 no descriptionno description
PS50102[15-93]T 15.443 PS50102 RRMRRM
InterPro
IPR012677
Domain
Nucleotide-binding, alpha-beta plait
G3DSA:3.30.70.330[16-91]T 2.6e-20 G3DSA:3.30.70.330 no description[124-161]T 5.8e-05 G3DSA:3.30.70.330 no descriptionno description
noIPR
unintegrated
unintegrated
PTHR23139[29-161]T 2.6e-71 PTHR23139 RNA-BINDING PROTEINRNA-BINDING PROTEIN
PTHR23139:SF9[29-161]T 2.6e-71 PTHR23139:SF9 SPLICING FACTOR U2AF LARGE SUBUNITSPLICING FACTOR U2AF LARGE SUBUNIT
seg[1-13]? NA seg segseg
SSF54928[16-91]T 1e-20 SSF54928 RNA-binding domain, RBDRNA-binding domain, RBD
SEQUENCE: RAFL08-12-N11_4_ORF2 CRC64: F9368CB3B35F0010 LENGTH: 57 aa
noIPR
unintegrated
unintegrated
seg[7-18]? NA seg segseg
SEQUENCE: RAFL08-12-N11_4_ORF3 CRC64: 632B83F90B417D9E LENGTH: 118 aa
No hits reported.
SEQUENCE: RAFL08-12-N11_4_ORF4 CRC64: 877EE36CBDC96593 LENGTH: 101 aa
noIPR
unintegrated
unintegrated
seg[1-44]? NA seg segseg
SEQUENCE: RAFL08-12-N11_4_ORF5 CRC64: 10B4D4118CB7BCE8 LENGTH: 86 aa
No hits reported.
SEQUENCE: RAFL08-12-N11_5_ORF2 CRC64: F0E7922A4512A8DE LENGTH: 98 aa
No hits reported.
SEQUENCE: RAFL08-12-N11_5_ORF3 CRC64: 64FC02F19C951771 LENGTH: 90 aa
No hits reported.
SEQUENCE: RAFL08-12-N11_5_ORF4 CRC64: 6A1936472D353F95 LENGTH: 185 aa
noIPR
unintegrated
unintegrated
seg[39-61]? NA seg seg[62-84]? NA seg seg[114-126]? NA seg seg[142-156]? NA seg segseg
SEQUENCE: RAFL08-12-N11_6_ORF2 CRC64: 8CBC9B98A5396FED LENGTH: 58 aa
No hits reported.
SEQUENCE: RAFL08-12-N11_6_ORF3 CRC64: 27247A14F41AA833 LENGTH: 103 aa
noIPR
unintegrated
unintegrated
seg[39-52]? NA seg seg[70-103]? NA seg segseg
SEQUENCE: RAFL08-12-N11_6_ORF4 CRC64: AB542563F1F98E9B LENGTH: 60 aa
noIPR
unintegrated
unintegrated
seg[1-55]? NA seg segseg
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