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11-0032-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 96306 [Map]; Strand: w
      • AT2G01140.1 - [+] show detail - Aldolase superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-0032-1 - 3-prime edge 
    CCGACGAGCT TGTTAAAACC GCCGTGAGTA TCCTCCTTAT CCTCTCTCTC 
    TCTTTGATGC TTTATTAGTT TGGATTCGTT TCCGTAATTC TCAAAGTCAA 
    ACGTAGAGTG AGATTCTCTG ATTATTGCGT AATAGAAAAG CATTGCATCC 
    CCTGGGAGAG GTATCTTGGC GATCGATGAG TCCAATGCAA CCTGTGGGAA 
    GAGGCTTGCT TCTATCGGCT TGGATAACAC CGAGGACAAC CGTCAGGCCT 
    ACAGGCAACT TCTGCTTACC ACTCCTGGCC TCGGCGATTA CATCTCTGGT 
    TCCATTCTCT TCGAGGAGAC TCTTTACCAG TCCACCAAGG ACGGTAAGAC 
    CTTTGTCGAT TGCTTGCGCG ATGCCAACAT CGTCCCTGGC ATCAAAGTTG 
    ACAAGGTATT TTTTATCCAT TTATTCTGTC ATCATCATCA TAAGTAGTTG 
    AGTTTTTATG TGTGTTAAGT GAAGTGTTGA CAATGCAATC CACCGTGTAG 
    GGCTTGTCTC CCCTAGCCGG TTCCAACNAA GAGTCTTGGT GCCAAGGCTT 
    GGATGGATTG GCCTCACGCT CTGCTGAGTA CTACAAGCAA NGCGCTTCGT 
    TTNGCCAAGT GGTATGTCAT ATATTTCACC ATGTAATCTT ACATATGGTA 
    TTAACTCTTT GGTTNGATGT GAAAATGCTC NNCCTAANNN NGAATGTTGA 
    CTCTTTNGAA TATNNGTNTG NGGGCGNTNN GNCTAGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8035281 [Map]; Strand: c
      • AT2G18520.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0032-1 - 5-prime edge 
    CTCGTCGGAG TAAGCACCGG CGCGGATCGC CGAAGGAGAC TCGACGANNC 
    GACGCNTCCA NNGACGNCGT CNCGCCTCTA TCTCCGNTNC CTCCGCCGCT 
    TCTCCACCGC CTCCGGTCTA GATNCTCAAA CCACGTGCTT ACCCNGGCGC 
    ANNTNACTAN GNCCAAAGCC TAAANCCAAA CTCCGNANAG NANNAGANCC 
    ACNACGNAGC CNTNGCGANG GTACAGNTCC GGNTGCGNCA ANGNNCACAT 
    CNCCACNNCN CCTCCCGCCA NNCAANGGAG GCTGGACAGN CCANCGCCCN 
    GCTNNAAGCT CANCNNCATC CNNANGNCCA NACCANACNA ATAAATAGAN 
    NAGNCACAAT AAANTGNCGC CNNATANTCN ACNACNCNNN NNCTNNNANA 
    NNTTNATNCG CNTAANNCAN GANCNNNAAG NNCCCGNGCC GGCNCACCNC 
    GCGTGCCGNT AAAANAGANN GCTGGANCCC GATNGANNTC NNCATANNAA 
    NNGCGNCGCA CCGAGCGNAA GNNGCANGNC CGANNNNGAT NNCNGCCNCN 
    CCTCCGNNAN GNNCNCANCN NCNNCAANGN AAAANNNTGN NGCAACACNN 
    CNNNANCNCG NNAAAAGNNN AACACCGNCA CNTCNNNCCA ACNNNACNTN 
    CCACNNANAG AGTANNGANA AANNNANANA GAACCTCNAN TCGCTCNAGA 
    CCCCNANNCA CNGCCCCGTC NNNNGGTAAA GCAGNGNGNG AGCNGGGNNA 
    NAAAAANGNN GGGNNCCCCC CTAAGNGGNC AACNNCAACG AANAANAAAG 
    AA

AT2G01140.1

Model type
Protein coding
Short Description
Aldolase superfamily protein
Computational Description
Aldolase superfamily protein; FUNCTIONS IN: fructose-bisphosphate aldolase activity; INVOLVED IN: response to oxidative stress, response to cadmium ion, pentose-phosphate shunt; LOCATED IN: mitochondrion, chloroplast, plastoglobule; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 2 (TAIR:AT4G38970.1); Has 4797 Blast hits to 4792 proteins in 909 species: Archae - 0; Bacteria - 723; Metazoa - 1159; Fungi - 8; Plants - 476; Viruses - 0; Other Eukaryotes - 2431 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G18520.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G36680.1); Has 27260 Blast hits to 10896 proteins in 232 species: Archae - 1; Bacteria - 5; Metazoa - 93; Fungi - 122; Plants - 26343; Viruses - 0; Other Eukaryotes - 696 (source: NCBI BLink).
Link
InterPro Scan - TAIR