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11-0126-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5323136 [Map]; Strand: c
      • AT5G16280.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon28 (3UTR)
      • AT5G16280.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon27 (3UTR)
    Flanking Genome Sequence: 11-0126-1 - 5-prime edge 
    CTTCTAACCG AAAAAGATTA ATTNTTTATT CTTAAAAAAT TNTGAATCTT 
    TTGTGGAATA AAAAGATATT CTGGCCTATT TTCAAGTTTT ATACTTTATA 
    TTTTAATAGC TGAGTTAATT TCTTTCGTTT ATTTTATTAG ATTATCTGAT 
    TTATATAAGA GAAAAAAAAC TTGAGAAATT GGAAATGCAG AACTTGCATT 
    TGATAAAGTT TAAATGTGAG TATTATGTTC ACTAATTCTC GTAAATTTAA 
    ACAAAATCGG GTGTTTAACA AAAAAAAAAN GTCATNGNCC AANCCAATNT 
    CTNAAAGGGC TTCAANNAAA AAAATNTTTT TCCTAACCGG NTAAAAATTN 
    GCCNTTNCNT NGNTNNANCG TNNNTTGNAC NCTTNNNTTN TNGAATAACC 
    AGCCNGGGCC GNNNACCNCC CTNGCCNNAT AANNNNNTNT GGACNGGGGG 
    CNNCCNGNNC GGNGNNTGGC NGCGCTAGAT TNGGNGNGCN NNTCGCTTCC 
    GCCCCNCCCC CTCNNCCTGN CACCCCCNCN GCGNNTATNN GNGNNGGGNN 
    ANCGTGTTAT NNTNNNCTCN NTNGGNNNCN NCNNGANAGN NCNNNNGNCN 
    ANGGNNCNNT CNGNNNCNGC TCNGNNNGTG NTTTNNTNTC NGCNCCNNNC 
    CANNNNGNNG NNNGANNGNG GGNTTGGGGN NNNNNGCGCN NCNNNNGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5323252 [Map]; Strand: c
      • AT5G16280.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon28 (3UTR)
      • AT5G16280.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
        Distance: 0; Region: exon27 (3UTR)
    Flanking Genome Sequence: 11-0126-1 - 3-prime edge 
    GTTAGAAGCA TTTCTTGACA ACAACTTACT ACAATCAAAA TTTGAAACTT 
    CAGACGTAAA GCATACAGAA ACCATCAAAA TGAATT

AT5G16280.1

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G16280.2

Model type
Protein coding
Short Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description
Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages.
Link
InterPro Scan - TAIR