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11-0133-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2223173 [Map]; Strand: c
      • AT4G04450.1 - [+] show detail - WRKY family transcription factor
        Distance: 2059; Region: intergenic
      • AT4G04460.2 - [+] show detail - Saposin-like aspartyl protease family protein
        Distance: -1249; Region: intergenic
    Flanking Genome Sequence: 11-0133-1 - 5-prime edge 
    CCCATAANCA TACGTTTCCT TGAAGTTNTA ACTTTTCATA TTGNGCTCAT 
    CTAACCCCNT CAAGTTTTCT TTCTTTCATT CTAACCCCTA AATTAGTGTC 
    TAAATACTAT TCCCCATTCA AGGCATGCAT ATAGTTTAGA GTGTATAAGT 
    ACTAGTGAAA GCACGTAAAA GATGTGACTA CTGGCTGTTT ATCTGATTAA 
    AAAACATATA GGCTTTGAAT GTATATTGAT TTGATTGAAA ACATGTATAG 
    CCTTTGAATG TTGTGTAGTA AGATGCAGAC CATACTAAAG TCGAATTAGT 
    TCACGCTTAA TTTGGATCAA TTATAGATAA AGCACAAAAA ACTTTGTGTC 
    ATTGTCTCTC ATATCATTTT TCAAAACTTT GTGTCATTGT CTCTCATATC 
    ATTTTTCAAT ATTCTTATAG AATTAGGTAC TTCTCTCTCA TTTGAGTGAC 
    CATTTTACCA TTTTTTCTCT CCTTTGTCTC TATAGCAAGT CATGATCTTC 
    ATTTTCCCTC AAAGAAATCA ATAAGGTAAT TCGTCGGTGG TTTGTATTTA 
    GATTCTAATT TGATTTTGCA ATTATGGTTC TTATGAAATT AGGATCAGCT 
    TTTAAGTGTA ATTTTTAAAA TAATCCCAAA TTATTTGTTA CGAGAGATAA 
    GAGTCTGTGT GAGAATGAAA AGGCCGNCTC TATTGATA

AT4G04450.1

Model type
Protein coding
Short Description
WRKY family transcription factor
Curator Summary
member of WRKY Transcription Factor; Group II-b
Computational Description
WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G04460.2

Model type
Protein coding
Short Description
Saposin-like aspartyl protease family protein
Computational Description
Saposin-like aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: response to cadmium ion, proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: aspartic proteinase A1 (TAIR:AT1G11910.1).
Link
InterPro Scan - TAIR