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Mutant Lines
11-0162-1

11-0162-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 1505943 [Map]; Strand: c
- AT1G05200.2 - [+] show detail - glutamate receptor 3.4
  Distance: 0; Region: exon2 (CDS)
- AT1G05200.1 - [+] show detail - glutamate receptor 3.4
  Distance: 0; Region: exon2 (CDS)

GCTATGGATG ATGTTAATGC TGACCAAACT GTACTTAAGG GCATCAAGCT 
AAATATCATC TTTCAAGACT CAAATTGCAG TGGATTTATA GGCACCATGG 
GAGGTATATA GACTGCTTCT TCTTCTTCTC TCTTGATACT GTTGCCAAAG 
GGAACAACTT TTGAACTCAG AACTAGCTTG TGAAAATGCC CCAAAGCATG 
AGTGATGATT ATGTTTCATC TTATGGTGTA GCTTTGCAGC TGATGGAAAA 
CAAAGTGGTT GCAGCCATTG GTCCACAATC TTCAGGGATT GCTCACATGA 
TCTCCTATGT AGCTAATGAG CTTCATGTAC CTCTCTTGTC ATTTGGAGCA 
ACGGATC

AT1G05200.1

Model type: Protein coding
Short Description: glutamate receptor 3.4
Curator Summary: member of Putative ligand-gated ion channel subunit family
Computational Description: glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 6705 Blast hits to 6546 proteins in 599 species: Archae - 47; Bacteria - 1309; Metazoa - 4441; Fungi - 0; Plants - 637; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05200.2

Model type: Protein coding
Short Description: glutamate receptor 3.4
Curator Summary: member of Putative ligand-gated ion channel subunit family
Computational Description: glutamate receptor 3.4 (GLR3.4); FUNCTIONS IN: protein binding, intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Glutamate receptor-related (InterPro:IPR015683), GPCR, family 3, gamma-aminobutyric acid receptor, type B (InterPro:IPR002455), Extracellular ligand-binding receptor (InterPro:IPR001828), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 3.5 (TAIR:AT2G32390.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR