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11-0163-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 767964 [Map]; Strand: w
      • AT1G03160.2 - [+] show detail - FZO-like
        Distance: 1806; Region: intergenic
      • AT1G03170.1 - [+] show detail - Protein of unknown function (DUF3049)
        Distance: -1668; Region: intergenic
    Flanking Genome Sequence: 11-0163-1 - 3-prime edge 
    CACGGGACCT AAGTTACACT ACCAACTTGC AACTGATTGC AAACTGATAT 
    G

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 768080 [Map]; Strand: w
      • AT1G03160.2 - [+] show detail - FZO-like
        Distance: 1922; Region: intergenic
      • AT1G03170.1 - [+] show detail - Protein of unknown function (DUF3049)
        Distance: -1552; Region: intergenic
    Flanking Genome Sequence: 11-0163-1 - 5-prime edge 
    GTCCCGTGAA AGTGTGGTGG ACTTGGAAAC TCTCTGTGTC TTTGTGATTT 
    CTTTGCCTTC AATTATTATC AGTGTTGGAA ACTTTCATCA ATAAGGGCAT 
    TTTGGTCTTT CACTTTTTTT TTTTTTTTTT TNNNTTTTNA ANNNNAAAAA 
    AATNGGGGGG NNNGGGGNNN ANAAAAANNN NCCNGGGNNT NNNNTNNNNT 
    NGNACNNAGG NNAAAAAAAT NNNATCNNCC CNCTTTTTNG NNGGAAAAAN 
    NATNCCCCNA AAANGGGGGG GGGGCNTNNC AAAAAAAANN ANANANTNNN 
    CNCNNNAANG GGGGGNGGCG NCAAACNCCA AAAAAANACA NNAAATANAN 
    AANNAAAANC NANNNGNNTN TTNNGAGCAT NNANCAAANN NNCAGNNNNG 
    NCNGTGGGGG CNNNGNANGA NGNAANNGNC ACACCACTNN NANANCCNCN 
    CGACAACTAC NGANGAAAAA AATCNGNNAG TTAGNGNTCN NTNNCNTATA 
    CACGNGANNT ANNCNTTNNN NNNCNTACGA GNAGGNGCAA CNANTGAGAA 
    TAGGTTGTNA AAGTANGGNG ACNNAGTGAN GNNNGTCTGN AAGNTCGANT 
    AAAANGAAAN NAGGGTNNCN TNNAGCAGNG GNAGNAGAGC NCNNACCANN 
    TCGCCANNAN NAGNGAANNC ANNCAAGANN GAGNAGAGAA TGANTNNNTN 
    NGGNGTNTTA GGGGGNCNNA GAAAAGNGNC NAANATGCAG AGTNGCTGNN 
    CCNNANANAA NNNNNNNCNA AGANCAANG

AT1G03160.2

Model type
Protein coding
Short Description
FZO-like
Curator Summary
A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization.
Computational Description
FZO-like (FZL); FUNCTIONS IN: thiamin-phosphate diphosphorylase activity, GTP binding, GTPase activity; INVOLVED IN: vegetative to reproductive phase transition of meristem, thylakoid membrane organization; LOCATED IN: chloroplast membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine monophosphate synthase (InterPro:IPR003733), Protein synthesis factor, GTP-binding (InterPro:IPR000795); Has 4303 Blast hits to 3755 proteins in 1119 species: Archae - 53; Bacteria - 3491; Metazoa - 428; Fungi - 84; Plants - 61; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G03170.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3049)
Computational Description
Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT4G02810.1); Has 91 Blast hits to 91 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR