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11-0164-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13952459 [Map]; Strand: c
      • AT5G35777.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 11-0164-1 - 3-prime edge 
    CTTGGAAGTC AGTGGATTTA CAAGACGAAA TACAACTCGG ATGGTACGAT 
    AGAACGGTAT AAAGCTCGTC TAGTAGTCCT GGGTAATAAT CAGATCGAGG 
    GAGAGGATTA CAAAGAAACT TCCGCCCCTG TCGTGAAAAT GACTACNGGT 
    TTGTGCTCTT CTTCGACTCG TTGCTGCTAA TCAATGGGAG GTATACCAAA 
    TGGATGTCCA TAATGCATTT CTCCACGGAG ACTTGGAAGA AGAGGTATAC 
    ATGAAACTCC CTCCAGGCTT CCGTCATTCA CACCCCGATA AAGTTTGTCG 
    A

AT5G35777.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 2.0e-67 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)
Link
InterPro Scan - TAIR