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11-0166-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14950454 [Map]; Strand: w
      • AT4G30620.1 - [+] show detail - Uncharacterised BCR, YbaB family COG0718
        Distance: -382; Region: promoter
      • AT4G30630.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -184; Region: promoter
    Flanking Genome Sequence: 11-0166-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    TGACNNNNNC NCGCGGATAA NCAGCCNNGG CCGTAGACCA AGNGCTGCCC 
    TATATAANAG TTTGGTTGAN ACAAACAGTG AAACAGGANA ANAAGCAACT 
    ATGGANATTT GACAANANAN ATGATTGGTG ACCTGGTGTG TATAATGTGT 
    GTATATATGA TGTACTTTTA TTTATTCTTT TAGTCAAATA CATGTTTTTG 
    CATAATTCTC AATTTCTCAT ATTATTATTG GACCCAAATC CTGTGAAAAT 
    AATCTCTTCT TTGGGCTTTT TCTCATATAA GCATCAATTT TAAAAGCCCA 
    TTAAACCCAA TTAAGGGATC

AT4G30620.1

Model type
Protein coding
Short Description
Uncharacterised BCR, YbaB family COG0718
Computational Description
Uncharacterised BCR, YbaB family COG0718; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0133 (InterPro:IPR004401); BEST Arabidopsis thaliana protein match is: Uncharacterised BCR, YbaB family COG0718 (TAIR:AT2G24020.2); Has 1854 Blast hits to 1854 proteins in 759 species: Archae - 0; Bacteria - 1576; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G30630.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits to 33 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR