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11-0171-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1521885 [Map]; Strand: w
      • AT1G05240.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    2. Chromosome: 1; Position: 1526486 [Map]; Strand: c
      • AT1G05250.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0171-1 - 5-prime edge 
    GCCGCAGGGA TGGACGCATC TCGAGATTGG AAGATGCAAG GGACGGTTTA 
    CCATCTCCTT TCGCCGACAT AAAGAAGCTG AAGAAGGACT TTGCCAACAA 
    GGGTCTTAAC GCTAAAGACC TTGTCGTTCT CTCAGGTATG TCTGCAGCTA 
    GCACCTTATG ATATGCAATT CTCAAAAGAG TTATCAATTC GAACAAAAAT 
    GGTTTCTTGA GTAGGGGGTC ACACCATTGG AATCTCTAGT TGCGCTCTCG 
    TCAACAGTCG TCTCTACAAC TTCACAGGAA AGGGCGATTC TGACCCATCC 
    ATGAACCCTA GCTACGTGAG GGAATTGAAG AGAAAGTGCC CGCCTACAGA 
    TTTCAGAACC TCACTGAACA TGGACCCAGG CAGTGCGTTG ACATTCGACA 
    CTCACTACTT CAAGGTCGTG GCTCANAAGA AAGGGCTCTT CACATCTGAC 
    TCTACGCTTC TCGATGACAT TGAGACCAAA AACTACGTTC AGACTCAGGC 
    CATTCTCCCT CCTGTGCTTT CTTCTTTCAA TAAAGATTTC TTCCGATTCC 
    ATGGTCAAAC TTGGGTTTCG TCCAAAATTC TTACCNGGCA AAAATGGGTG 
    AGATCAAGGA AGANATGCGC CCTTCCCTAA CGCATTTGAT CGATCAAACC 
    CGGGTTTCGG ATNGATTTTN AAGTCNCCCN TTNTTCTTTG CTTANTTTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1521814 [Map]; Strand: w
      • AT1G05240.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    2. Chromosome: 1; Position: 1526557 [Map]; Strand: c
      • AT1G05250.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 11-0171-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTC 
    TGCCCAATGG AACCGGCCNC CATGGTCCCC CGATCTGTTC AAAGACAATT 
    AATAAGTTAT ATACATACTA TAGTCTTTAG TTTTGGAATG ACAAAATCAC 
    TAGTCCATTG AGAAAATGGA ATGTTACCAC TGCCACGGCA TCTCTGGCGA 
    CCAAGGCAAG AACATCAGCG CAAGAAATGA GATTAGGACA CTTCCTCTCC 
    AGCGCTGTCT TGGCCGCATC CACCACTTCA TAACCTTTCA GGGTCAGGTT 
    GGGGACAGCG TCTCTTTCCG CATCATTCTT TGCAAATTTC ANAAGAACGG 
    AACCATCACA TCCCTACATG AATNATTACN AACGAGAGTT AGGACTAACT 
    AGTTNTTTCA TATCCCTTGG TTAACAGTCT CGAACAAGTT GAACCNATCT 
    ACCANACCCN GGCCGACAAC CNNNACATNC NNTNAATAGN ANNGTNAAAN 
    NGGNCGNANN GTNCTANNTG GNNCGGNCGG NGTTTGTGNN GNANANGGTN 
    GGGGTNGTNN GCNTGTNCGN TTTTTGGGTG TAGGTATNNT GNGGTTNANA 
    NNNTGTATNG GNNGNTGGTT GGNATTTNNA NTTANGAAGG GNGTTNTCNN 
    ATGTGNTAGN NAATCGNGNT TAGAGTAANT NCTNCANNTN AANANNAANG 
    AANANATANN ANANANANNT CGCNAATNCG GNAANCAACN NTCGCNATNT 
    NGANCTNNNN NNNANTNNCN TAGCNATAAN ACACCTNAAT NAAAAGNNA

AT1G05240.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: plant-type cell wall; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05250.1); Has 4227 Blast hits to 4200 proteins in 227 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 50; Plants - 4133; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G05250.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05240.1); Has 4227 Blast hits to 4200 proteins in 227 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 50; Plants - 4133; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Link
InterPro Scan - TAIR