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11-0191-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1609431 [Map]; Strand: c
      • AT5G05440.1 - [+] show detail - Polyketide cyclase/dehydrase and lipid transport superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0191-1 - 3-prime edge 
    GTCACCGGTG CAACTCCAAC ACGGCTCAGA CGCCACTAAC GGTTTCCACA 
    CGCTGCAGCC TCACGATCAG ACCGATGGTC CGATCAAGAG AGTGTGTCTC 
    ACGCGCGGTA TGCATGTCCC TGAACACGTT GCGATGCACC ACACACACNG 
    ATGTTGGTCC GGACCAGTGT TGCTCCTCGG TGGTGCAGAT GATCCACGCG 
    CCGCCTGAGT CCGTGTGGGC TCTTGTGCGG CGTTTCGATA ATCCGAAGGT 
    TTACAAGAAC TTCATCAGAC AGTGCCGTAT CGTCCAAGGC GATGGACTAC 
    ACGTCGGCGA TCTCCGGGAG GTCATGGTGG TCTCTGGACT CCCGGCGGTC 
    TCGAGCACCG AGAGGCTCGA GATCTTGGAC GAGGAGCGTC ACGTGATAAG 
    CT

AT5G05440.1

Model type
Protein coding
Short Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Curator Summary
Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.
Computational Description
PYRABACTIN RESISTANCE 1-LIKE 5 (PYL5); CONTAINS InterPro DOMAIN/s: Polyketide cyclase/dehydrase (InterPro:IPR019587); BEST Arabidopsis thaliana protein match is: PYR1-like 6 (TAIR:AT2G40330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR