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11-0198-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3247973 [Map]; Strand: c
      • AT1G09960.1 - [+] show detail - sucrose transporter 4
        Distance: 773; Region: intergenic
      • AT1G09970.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: -4267; Region: intergenic
    Flanking Genome Sequence: 11-0198-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATATCA CTTCTTAGAT ATTAGCCAGG GCCTCTCCAA 
    ATCCCAACAG ATTTTTTAGG TCCCTTGTGC TCCTCCTCCA CACGTGTATT 
    CCTTTTTCTA AATTCTTTAG GCATATT

AT1G09960.1

Model type
Protein coding
Short Description
sucrose transporter 4
Curator Summary
low affinity (10mM) sucrose transporter in sieve elements (phloem)
Computational Description
sucrose transporter 4 (SUT4); FUNCTIONS IN: sucrose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity; INVOLVED IN: sucrose transport, transmembrane transport; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 2 (TAIR:AT1G22710.1); Has 2568 Blast hits to 2441 proteins in 632 species: Archae - 30; Bacteria - 1104; Metazoa - 451; Fungi - 193; Plants - 403; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G09970.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Curator Summary
RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.
Computational Description
LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 209037 Blast hits to 140396 proteins in 4701 species: Archae - 173; Bacteria - 22554; Metazoa - 63531; Fungi - 11010; Plants - 85931; Viruses - 478; Other Eukaryotes - 25360 (source: NCBI BLink).
Link
InterPro Scan - TAIR