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11-0230-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1251869 [Map]; Strand: w
      • AT1G04570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: -3094; Region: intergenic
      • AT1G04580.1 - [+] show detail - aldehyde oxidase 4
        Distance: 253; Region: intergenic
    Flanking Genome Sequence: 11-0230-1 - 3-prime edge 
    AGAAACGCAA GTCACCTCAA TTCAGATCAA GGGCAGTAAA AAATAAATAT 
    ATGATTCTTG TAACGGTCAC TTTTTATTAT TGATATAAAC AATTTCCTTT 
    TTTTATATTG GTATGAATAA TTTCCTTTTC TTGGAACAAT TTAACCTAAC 
    ATTTTTTTTT TCCGTGGGCA NCCTTTNTNT NTNTNTNTNA AAAGNCCTNT 
    TTTNTCNAAA NCAAAAATCC NCCTTCTTCT TCTTNTTTTT TNTTTTNAGC 
    CNCNGTTNCT TNTTTATNAA GTNCTATNCC TTTNTTACAA ANANAACNCN 
    CCGANCNCNA AANCGTCAAA ANATCGANNA CCNTCCGCCC CANNGTCNTN 
    GGATNACCAN CCNGGGCCGT NAACCNCCCG NGCCCCTATA A

AT1G04570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Biopterin transport-related protein BT1 (InterPro:IPR004324), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G33280.1); Has 816 Blast hits to 814 proteins in 271 species: Archae - 6; Bacteria - 387; Metazoa - 0; Fungi - 18; Plants - 232; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04580.1

Model type
Protein coding
Short Description
aldehyde oxidase 4
Curator Summary
Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.
Computational Description
aldehyde oxidase 4 (AO4); CONTAINS InterPro DOMAIN/s: Aldehyde oxidase/xanthine dehydrogenase (InterPro:IPR016208), Ferredoxin (InterPro:IPR001041), Molybdopterin dehydrogenase, FAD-binding (InterPro:IPR002346), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675), [2Fe-2S]-binding (InterPro:IPR002888), FAD-binding, type 2 (InterPro:IPR016166), CO dehydrogenase flavoprotein, C-terminal (InterPro:IPR005107), 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 (InterPro:IPR016169), Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead (InterPro:IPR000674), Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding (InterPro:IPR008274); BEST Arabidopsis thaliana protein match is: abscisic aldehyde oxidase 3 (TAIR:AT2G27150.2); Has 17858 Blast hits to 17128 proteins in 1274 species: Archae - 410; Bacteria - 10596; Metazoa - 1017; Fungi - 119; Plants - 281; Viruses - 0; Other Eukaryotes - 5435 (source: NCBI BLink).
Link
InterPro Scan - TAIR