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Mutant Lines
11-0236-1

11-0236-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 2373868 [Map]; Strand: w
  - AT3G07410.1 - [+] show detail - RAB GTPase homolog A5B
    Distance: -312; Region: promoter
Flanking Genome Sequence: 11-0236-1 - 5-prime edge
```
TTTATTTCAA CCACCATATT CAAAATTCAA ACTATATTTC AAAAGCT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 2373752 [Map]; Strand: w
- AT3G07410.1 - [+] show detail - RAB GTPase homolog A5B
  Distance: -196; Region: promoter

GAAATAAATA TGAGGAAACT ATGGACAACA AAAAATGTAG TTGAGAAATG 
TATATTTTTT TCTTCATTTA ATAGAAACTT ATTTTCAGAA AATTAAATGT 
TATCTAGCAA ATTTTAAGAG GATTAGGTGT TTTCGAATTT TAGCAAAATT 
AAAAAAGCCT AAACTTTGGC ACTAATCAAA ATCTTTAAAC GTAATTAATT 
AAGAATTTAA TGAGTTTGTC TATAGGAAAC CCCGCCAATC ACGCAGCTTG 
TCTGTCACCA CTTTACCACT TATCAAAGCT

AT3G07410.1

Model type: Protein coding
Short Description: RAB GTPase homolog A5B
Computational Description: RAB GTPase homolog A5B (RABA5b); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G43130.1); Has 27936 Blast hits to 27886 proteins in 749 species: Archae - 21; Bacteria - 143; Metazoa - 14734; Fungi - 3835; Plants - 3288; Viruses - 20; Other Eukaryotes - 5895 (source: NCBI BLink).
Link: InterPro Scan - TAIR