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11-0245-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1238229 [Map]; Strand: c
      • AT1G04540.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0245-1 - 5-prime edge 
    TCGATAAGTA CGGGGAAGCT CGGCCACGAT CGTAAGCTTT CACTGATCTT 
    TGTTTCTCGA TCCTTGTCTT CTTCCTCGGT GTCTTACCTG ATTGTTGATA 
    CGAACTATAC GGCATAACAT CGTGTCTCTC CCTTCTCGAC ACTACCACAT 
    GGGGTTTCTC CATTGGCGAC GGATTTATGA GATC

AT1G04540.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT2G33320.1); Has 556 Blast hits to 454 proteins in 75 species: Archae - 0; Bacteria - 32; Metazoa - 92; Fungi - 46; Plants - 336; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
Link
InterPro Scan - TAIR