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11-0263-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 10281829 [Map]; Strand: w
      • AT5G28290.1 - [+] show detail - NIMA-related kinase 3
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0263-1 - 3-prime edge 
    GATGGAGCAT TACGAGGTTC TTGAGCAAAT TGGGAAAGGT TCTTTTGGGT 
    CAGCTCTTCT TGTGAGGCAT AAACATGAGA AGAAACTGTA AGAGATTGTG 
    TTTATTTGAA ACTGAAACTG GAGAGAGTTT TTGTTAGTTC TTCAATGATT 
    GATTCTTTGT TATGTTCTGT TTTTTTTTTT TTNNTTTTGG GTTNAAAAAA 
    TTTTTTTTAA AAAAAANTNC GNTTCCCTGG NCNNNCNGGN AAANNAAAAN 
    GGNCNCCCCN NNAANNGGNN NTTTTNANCC CNTTTTTNNC CCNANGGGGG 
    CCCNNTTTTT TTTTTNNNNG NCCAANTTTT TTTNGGNTTT NNAAANNAAA 
    ANNAAANNGG GGNCCCTTNA ANGNANNNNC CNTNTNAAAN TTTTNGCCCC 
    NAAAANTTNA AANNNTTAAN GGNANCNGGG GGNAAAAAAN TNCCNANNAA 
    ANCCNTTNCN TTTTNAAANC NNNCNGTTTN CCTNNTTTNN NNNNNGNAAN 
    GGGANTNGNN CCCAAAAAAA NGNANCCCTT TTTTNGGGNA ANNAAAAAAT 
    NNTGGGGNGN AAAAANAAAT TNNNNNACCC CNNTTTNTNC CTNNTTNAAA 
    AATTTTTTTN GTTCCCCNNC CCATAAAAAA NNNNAAAANG GCCCCCNGGG 
    GGNTTTTCCC NGGGGCCCTT TGGGNCCNTN NNNNNNGCCT TTCNAANGGN 
    GGNACNNNNA AAANNGGGGC CCCCCCCAAA GTTTTTCCCC CCN

AT5G28290.1

Model type
Protein coding
Short Description
NIMA-related kinase 3
Curator Summary
Encodes AtNek3, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.
Computational Description
NIMA-related kinase 3 (NEK3); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2); Has 124194 Blast hits to 122056 proteins in 3852 species: Archae - 107; Bacteria - 14304; Metazoa - 45560; Fungi - 12271; Plants - 30693; Viruses - 504; Other Eukaryotes - 20755 (source: NCBI BLink).
Link
InterPro Scan - TAIR