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11-0269-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30104356 [Map]; Strand: w
      • AT1G80020.1 - [+] show detail - transposable element gene
        Distance: -457; Region: promoter
    Flanking Genome Sequence: 11-0269-1 - 5-prime edge 
    GCGGGAATAC NACTGANGGA AGCGCGGAAT CCGAGGCNCA ANANCGAATC 
    ATTTTGAAAA NACAAAAGAN AGAGAGATGA AGGAGACGAG ACGAGGTTAA 
    TGGGCTTTGG GGATGATGAG CNTGATTTTG TTCGGCTCTG CTTCTTTCTT 
    TTTGATCGAA AGAGATTCTC AATAGAGAGA GAGAGAGAGA GAGAGNGGCT 
    ACNCTCTTCT CTTGCGTGTG TTNNGGACCT TATTATCACG GCNNGGGTTN 
    NGNGCTTTTT TTNTTTTCGN CCTTTTCTCT TCNCCTTTAT ATNTATNATA 
    TANNCCATGT GGGGNGGGCA AAATNGGTAT TCACTCACAT TCNCTCTTCT 
    ACAAAGATNT ACTTNTATTT TTNNCTTTNC ANNCGCNCCT GTCTATCTGN 
    CACACAANAT TNTANCTNTG CGTNAGTNNG CTNCACCGNA TATGTAANTT 
    ATCTATATAA AATTAAGAGA GATANCCTGN GCAAACACAC ACAAAGGGGG 
    AAAAGNGGGA GTGAATATTG TTATAANNGG CACGGGTTGA AAANCGCATG 
    ATTGCNCTGC GTNTGCTAGC GCNGGATCTT CTTNANTGTC TNTNNAAACC 
    CTGNGGCTAA AAANGCCGCC NCTCTGTATA TAAAAAAAAT CACNCGAGNG 
    GCCTNCGNAT TTTNNGAAAA NCATGTGNNA TANGCCCACA AAAAAATAAN 
    CCTTCTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30104240 [Map]; Strand: w
      • AT1G80020.1 - [+] show detail - transposable element gene
        Distance: -341; Region: promoter
    Flanking Genome Sequence: 11-0269-1 - 3-prime edge 
    ATTCCCGCTG CTACAATCTG TGAGTCCTAA TCTTTTTCTC TCTGTTAAGA 
    TCTCATATCT TAGATCTCGC TCTCTCTTCT TACTCGATTT TACTCTGCTT 
    TTCCAGATCG CCTGAATT

AT1G80020.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
hAT-like transposase family (hobo/Ac/Tam3), has a 5.0e-62 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana)
Link
InterPro Scan - TAIR