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11-0364-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19587544 [Map]; Strand: c
      • AT2G47820.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron1 (5UTR)
      • AT2G47820.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0364-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    TAGATTGGCT CTGCTTTTTG ATTTTATTGC TCCACGTTGA ATGTTCCGAC 
    TTCTTCTTTC TTCTTCTTCT GTGGAGGTTT GTTGCCAAAG TCTTCCTATG 
    TGACTATGTC TTGTCTTGTA TGCATACTAC TACTAGCCTC GGCTCTTATG 
    TTCAACAATT ACTCCTTTCT TTGTTTTCGT AGCCATACGA ATCATGTATT 
    TTTCATGAAT TGGCGTGCCT TCCCTGGGTT TTTGTTGTTT TCTTATGAAT 
    TGGGTCAGTT TCTGTCTTCC CTAGCTTTTA AAGCTGGTTT CATTATGGTT 
    TCTAATAAAG AAAGAAAAAC GGCAGCTTTA ACTTGGGTTT CGGAATCGTT 
    TCATTCAATG TTGGCTCTCT TCTTCTTCGT GTCTTGTGAC TTTGGAATTT 
    CATCTGCATT CTCTTTCAAT CTTAGGGTTT TTCTGTATTT GGGGATGTCT 
    TTTGACTCCT TCAACCCCAA CTTGTGTGTC GNTAGAGAAT GTTGCTTTTG 
    GATGTGTGTT TGGCTCAGAA ACACTTAACA AGCT

AT2G47820.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1); Has 628 Blast hits to 543 proteins in 149 species: Archae - 0; Bacteria - 106; Metazoa - 145; Fungi - 69; Plants - 97; Viruses - 10; Other Eukaryotes - 201 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G47820.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09040.1).
Link
InterPro Scan - TAIR