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11-0368-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2104858 [Map]; Strand: w
      • AT1G06850.1 - [+] show detail - basic leucine-zipper 52
        Distance: -190; Region: promoter
      • AT1G06850.2 - [+] show detail - basic leucine-zipper 52
        Distance: -197; Region: promoter
    Flanking Genome Sequence: 11-0368-1 - 5-prime edge 
    TACAGAATCT TGTAATGAAT GCTACAAAGA AGATTTAAAG TTAAACAAAT 
    TTAAATCATG AAATCGAATA ATTAAATAAA ATACAAAGAA AAAGGAAAAA 
    AAAATAAAAA AAAAGGGNGG GAGACAAGAT GCCTGCNATG GTTCACCGTG 
    CCAATGNGCC TTTTACTTTT CATCAACTAG TTTTCTTTTT AATTATTAAT 
    AAATCANCTC AATTTCNCAA TTTTATAGTT AGNGACGTCA CTTNTCTCTC 
    CTCACANAGT CNAGTTTCTC TCCTACNCTC TTCATTTCAT TTCNTTTGAT 
    NGAGAGAGAG AGAGAGAGAG AAAGAGCTTC GTNTTNTTNA TCNCCATCNT 
    TATCNCCATN GACATTGTTC TCAATGGCNA ANAATAATCA TANTTNTTCN 
    CNCNCCCAAA GCNTTNATCT CTNAAATTCT NTTAAAAAAN GGGANAAATC 
    ANATCCNCCN CCAGNCCNAA AGCCCGGNNC CANTNTNANC CCCNCCNCCG 
    ATCCATTTCC NANGGCCGAT CCNNTNCCNT TTTTTTNCTT CCNCCGNCNA 
    TNTNNCTNNN NNNATNNNCC CTGTNNNTGN NNGGGGGNNN CCANCCNGGG 
    GNNNNNNCNC CNCNCNCCNN NNNGNG

AT1G06850.1

Model type
Protein coding
Short Description
basic leucine-zipper 52
Computational Description
basic leucine-zipper 52 (bZIP52); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40620.1); Has 1688 Blast hits to 1688 proteins in 185 species: Archae - 0; Bacteria - 22; Metazoa - 232; Fungi - 142; Plants - 1216; Viruses - 2; Other Eukaryotes - 74 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G06850.2

Model type
Protein coding
Short Description
basic leucine-zipper 52
Computational Description
basic leucine-zipper 52 (bZIP52); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G40620.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR