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11-0391-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2560318 [Map]; Strand: w
      • AT1G08160.1 - [+] show detail - Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0391-1 - 5-prime edge 
    CCGGCAGGGG TTGTGCTCGA GGTTGCGATT GGGGTTGCAG TTGCGGTTGC 
    AGTTCGCCGA GCCGGTTGGT GGGCTGGGTT TGGAGGCACC ATTGTCAGAG 
    AAGGTTTTGA TGGACTTCAG TTAATTGCTT GGAAAGGATA GAGAGCAAAG 
    ATTGATTTGA TTGCTTTGAT ATGGTTCGAC GATATATATA AAGGGACTAA 
    CACGGACAAT TAGATTCTTT GCCTTTGTAT AAGGATTAGT CACAAAACTA 
    CTGATTTAAA ATTCTTAATT CTTTAGCATT GCTTGTGAAT GAATCAAGAA 
    ATCTTGGAAG CTGGAAGATT CCTACTTTTT TTTTTTTGGG TTNAAATTNT 
    TNNCTTTTTT TNGAANCNTN NANNAANNCN NNANNTGGGG GGNNAAAAAN 
    ATNNNTNTTT TTTTTTTNCN AATNCNNNNG AAANTTTNGN CNCCCCCTTT 
    TTTTTTTTNA ANNTAANNNC CGGNTTTNNN TNNAAAANNT NANTTTTTTT 
    TTNCCCCCCN NNNNNNTNAN AAAANGGAAA TTTNNNNNNN NGGGCNNNNA 
    ACNNCCCNNN NNNTTT

AT1G08160.1

Model type
Protein coding
Short Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Computational Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT5G22870.1); Has 611 Blast hits to 611 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 611; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR