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11-0394-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 910716 [Map]; Strand: w
      • AT1G03640.1 - [+] show detail - pre-tRNA
        Distance: -833; Region: promoter
      • AT1G03650.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-0394-1 - 5-prime edge 
    TTGTCTAGTC AGAATTTCTA TTGAAAGCTC TCGAATTTAC CAGAATCATT 
    GGTCCTTGAC TATATAATAA TCTACAGGTT AATTTATCAA ATGGTTGAAA 
    GATTTTTCAG TAGAAGTTTG GCAGAATAAT TCCACNTTCT TCTCTAACGA 
    AATTATATTT TCTGAATTTT ATCACTGAGT AATTTCATCG AACAGTTGGC 
    GGACGTTTGT CTATACCTGC GAGCTTGGTG ATTGAAGCGG AAAGCGAAGA 
    TGGCCAAGAA TACATGGCAT AGCCTACTGT GTCTCCTTCA GCATCCACGT 
    ATAGCAAACC GGCGTTTTTC TTACGCAGCT CTGCATCGAA AGTTTGAGCG 
    AGAGATTCGT GTTTAGGGAA CGTTTTCTTC TCCAGCTTCA CGATATCTTC 
    CACAACTTTG GCCCAACTGG TCGACCCTCT AATCAGCTCT ACCACNACNG 
    CNNTGTCCAT TGTNCANAAG ATTCGATTTT GTGGAATCTC TCGTTGGTTT 
    CGCAGCCGGT GAGAGCGAGT GAGCCAAGGA AATTGTGATT TGATTTTGAT 
    GAANGTGCGT AGCGACGGCG GGGACGACTT TTAAAAACTA TTTTGAAATT 
    GTGATTTGAC CCACAAATTT AACTTTTGTG ACAATTTANT CCCCANAAAC 
    AGAGGAACTG TTTCAGAGAC CCCACCCAAT TTAAANACAA CATATTTGAT 
    CATCACTGGG AAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 910600 [Map]; Strand: w
      • AT1G03640.1 - [+] show detail - pre-tRNA
        Distance: -717; Region: promoter
      • AT1G03650.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-0394-1 - 3-prime edge 
    CTAGACAAAG CCCTTGTTCT AGCTTTGGTT TTGCATGCTT AAAGATTAAT 
    GGAGATAGCT CATAAGTCAA GAACACGTAT GGAATTTTTC TTATTAGGCA 
    AGTTAAGAGC AAAAACATTA GGAAGAATGT ATCCCAAGTT TACTTTCTTC 
    TGTTGTTTTG GAATCATGTA GTGAAGGAGA ATTGCAGAAG ACAAGGTCAT 
    GGAGAAGCAT TGTTGAGAGC GGCTATCGAC AAGTGCAGAA GCAGAAAGGT 
    GCAACGGGTT TCACTTCATG TCGACCCCAC GAGAACTTCT GCGGTGAATC 
    TGTACAAAAA GCT

AT1G03640.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Phe (anticodon: GAA)
Link
InterPro Scan - TAIR

AT1G03650.1

Model type
Protein coding
Short Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Computational Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein; FUNCTIONS IN: N-acetyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); Has 3295 Blast hits to 3295 proteins in 1287 species: Archae - 200; Bacteria - 2223; Metazoa - 217; Fungi - 220; Plants - 88; Viruses - 0; Other Eukaryotes - 347 (source: NCBI BLink).
Link
InterPro Scan - TAIR