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11-0488-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5084990 [Map]; Strand: c
      • AT3G15110.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT3G15111.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -870; Region: promoter
    Flanking Genome Sequence: 11-0488-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TCCAAGTATC ATCATGGTCT CAATAACTGT 
    AAATGCCCAT AATTGAGAAA TAGCTATATT CATTATGGAG AGGACCCATT 
    CTTGTCCATG ATTTCTGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5084996 [Map]; Strand: c
      • AT3G15110.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT3G15111.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: -864; Region: promoter
    Flanking Genome Sequence: 11-0488-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    ACAAGGTACT GTTACTTTAC CAAAGCAAGT TAGACAGAAA CAGCAACTTT 
    GACACAAGCA ATGGATGATC AAAAAGAGAG AGAGAAGAAA CGAACCGAGA 
    AGTTATCAGA GATAGTCTGA CGATTGAGTC CTGATTCAAC TGTAACAGTG 
    AATTTGTAAA GAATGAGAGC AATGACTCCT GCGGCTATCG CACCAAGAAA 
    CGCCTGAGCC GCCGATGGAG TTGAATTACC ACCTTCTATC GGAGTTGAAC 
    TTAACGCTTT TAGATTATCC ATTGCTTCTT CTTTCAACGA TTTCTTAGCT 
    CCAGTAGATC TAAATGTCTA CAATTCCACA CCAAATCACT CATATTCCTT 
    CCCAAATTTC AAACACAATT CTCCCAAATT CAAGTGTAAC AGATCAAAAC 
    CATTGGTTAA ATTCGATTTA GACCAAATTC GGTGGTTATT TGTTCCTTAA 
    GAATGTCTAG GGTCTAAGTA ACGAGATATT ACCAGCTCTT TGGCGCGTTT 
    AGCGCGCCGT CGAACGGAGC GGATGAGGAA GACAGTGATG GCACCGGTAA 
    GAAGCACACT GGTGGCCAAT TGGAGAGGAG TAGGATCATC GGAAGTGGCG 
    AAAATGGAGT TAGTAGACGA AAACGGAGAC GTGGACGACG TAGGAAGCTC 
    AATTGGACCA TCTTCTTNCA CCTNCGCCAC ATCGGCGATT TCTTTTACGG 
    CGGATAATCG GATTATACCG GGACGGATCA CCAG

AT3G15110.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G15111.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR