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11-0504-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25514960 [Map]; Strand: w
      • AT5G63750.1 - [+] show detail - RING/U-box superfamily protein
        Distance: -19; Region: promoter
    Flanking Genome Sequence: 11-0504-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCCATAAGC GAGTGAGAAA AGGTAAAACC CTAAAAAGTT GAAACAGAAA 
    TCATCTAGAG ACGATTAAGA GAAAACTAAG AACGATAACT CTCGCCTTCG 
    ATTCTTTTTG TTGATTGAGG CGCAAGCTAC CTGTAAGCCT TAACCCTATT 
    CCTTATAAGT GTATCCATCG ATCGATCTCT TTGTTATGAT TCATTGATTT 
    GTTTTTCTGA TTTTTGTCAA TCTTAGGCAC ACAATGGAGA ACAATCGAGA 
    GGGACCATAC TCTGTTCTAA CGAGAGATCA ACTTAAAGGA AAGATGAAGA 
    AGCAGATCGC CGAAATCTCT GAGATC

AT5G63750.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
ARIADNE 13 (ARI13); FUNCTIONS IN: zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT5G63730.1); Has 1670 Blast hits to 1662 proteins in 206 species: Archae - 0; Bacteria - 0; Metazoa - 716; Fungi - 141; Plants - 537; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink).
Link
InterPro Scan - TAIR