Home
Mutant Lines
11-0515-1

11-0515-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19644420 [Map]; Strand: c
- AT2G48020.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon2 (5UTR)
- AT2G48020.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon1 (5UTR)

CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCT CCCTTGAGCA CTTGGCTAAC TCAAAAATTG 
CAAAAGAGAC GAAGCCTGAA GCAAAAGTTG AGTAAGAAGA CAGAAACATA 
CAAGAAGAGT AAAATGGAAA AGCGGAGGAC AAGAATTAAA GGTGAAAACT 
TTTTATGGGT AAGAGTGACC CTTTAGGCAA GAAATCCTTT GTGGGGTTTG 
TTACCATTCA AGAGATGAAA GCTGTTTTAT GTCCTTTACC AAGAGCAGCC 
ATGGATTACA ATCCAAAAAT TTGATTTCAG ATTTTCTGAT GATAACCATT 
AAACTAGAAT ATAGCTAATG ACAACGTTGA GCCCACTCGG GGGAGTTCAA 
ACAAAAATGA GTTTATAAAC TACTTATCCA CTATGTGTAT ACTAAAAGAT 
ACACTAAGCA AATTCACATT TAAAAAAAAA AAAAAAAAAA NNTNTCCANN 
TAAANTTNAN TCCCCCCCCC CCNCCCTNTG GGNNGGNGGG GTTGGNNNAA 
AAANAAANCC GNNNNNTTTT GGCCCNTTTN NAAAANCCTN GATCTNNGNT 
TTTTTTTTNA AANTTTTGGG NANNCTTTTT TTTNTNNCCC NNNAAAANNA 
AAAANNCCCC CCNAACCNNT TNAAANAAAA NTTGNNTTTT TTTTNTTTTT 
TGTNCCNNNA AAAANNANNT NGNTNNNANA ANNTNGTNTT ANNNNNNNNC 
CTTTTTTTTT TAAAAAA

3 prime edge [+] show sequence

Chromosome: 2; Position: 19644429 [Map]; Strand: c
- AT2G48020.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon2 (5UTR)
- AT2G48020.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: exon1 (5UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAAATA 
CATAATACCT GAAGATGTCC AAGGCAAGTG ATGCCGTCAG AGAACCATTG 
GTGGACAAGA ATATGGCTGG ATCAAAACCA GACCAGCCGT GGATGGTTTA 
TCTCAGCACA TTCGTTGCGG TCTGTGGTTC TTTTGCGTTC GGTTCTTGTG 
TAAGTGATTT TAGATTTATG GAAAGTCACT AACTTTGTTT CTGGTCTAAA 
AATGAACGTT ATACTAAAAC TTGGTTTCGT TGCAGGCGGG ATACTCTTCA 
CCTGCTCAGG CTGCAATTAG GAATGACCTT TCATTGACTA TAGCTGAGGT 
ACATAATCCT TCTAGGAAAG ATTGTTCATC ACTTATTCAT TGAATGTTGC 
TTACCTCTAG CTTGGATTCT GCAGTTTTCA CTCTTTGGTT CTTTACTAAC 
TTTTGGCGCA ATGATCGGTG CTATAACAAG CGGGCCTATA GCTGATTTAN 
TTGGAANAAA GGGGGTAAGG AAATGTTTGA AACTTTCCAT CTATTAGTTT 
TCTTTGTGNT GACAACCCCT NCTTACTTTN TGGTGGANCT NTNTCCANGC 
CAAAAAAAGN TNNCCNCTCC TTTNGNGTNN CNGGNGGGNG GCAGAAGTTT 
TTNCCGNGGN TTNCCCANNA ANANACCCCG GGCNNGNGNN ACACTNNCNN 
NANGGAGNAA AANAGNNGAA NGAANNAANT NATNCANGTN AGNNGNNNNN 
NNNNGNNNAN NCCGGNNNTN GANNA

AT2G48020.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 32576 Blast hits to 32035 proteins in 2204 species: Archae - 531; Bacteria - 16009; Metazoa - 5272; Fungi - 6662; Plants - 2708; Viruses - 2; Other Eukaryotes - 1392 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G48020.2

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G18840.1); Has 32576 Blast hits to 32035 proteins in 2204 species: Archae - 531; Bacteria - 16009; Metazoa - 5272; Fungi - 6662; Plants - 2708; Viruses - 2; Other Eukaryotes - 1392 (source: NCBI BLink).
Link: InterPro Scan - TAIR