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11-0541-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1245300 [Map]; Strand: w
      • AT1G04560.1 - [+] show detail - AWPM-19-like family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0541-1 - 3-prime edge 
    ACCACAGCCG CCAATATCGA AAACGTCAAG AAGAACGGTG TTGCTCCATT 
    GCCTCCAAAA CCTATTCAAA CATTACTAAT TAATATTCTT AGTAATTCCA 
    TTAAATCAGC CTACATGATC ATATATATAG CTATAGAGAT AAGAGAAAAA 
    GAAATTTACC TTGGGTGGTT AGTTTGGCCG TTGATGTATT TATTGAGACA 
    CCAACTTGCG AAACCAAGCA CAATCAGGTA CATAACAAGA TTCAAGAACA 
    GCAATGGTGC TGCTATGTTT CTTCCCACTG TCGTCGCCAT CAATTTCTTC 
    TTTTACCTTC TCCTAAAGAT CTAGTTTTAC TCTTTTGCTA CTCAAAACCT 
    TTCTTCTCTA TGCAATTCAA CACTTAAACT AGTTGCTCGG TGATGATCTT 
    TCTATATGGA ACGGATATGT GAGACATAGT TATATACACC GAGCTTATGT 
    GTTCGTTGGC AAGGAGCACG TGCCATGCGA AGAGGACCTT TGTGTTTAGC 
    TACTTACAGG TGGTGGGACA CGTGTCTTGA CGTTGTTTTA AAGNGTNGGA 
    TATNGCCAGG TGTTGTCATT GAGCTCAAAT CTCNAAACGG NTNTNTNTAN 
    NTNATNTGCC TTATGNNGNT ANNANANNGA AGGNCCCAAN GCTACGATAT 
    ATNGGGGGNN NNNANTNANT NACTTTGTGA NAANCCANCG GGATTNNGTG 
    AAAANNNGNN NGGAANGGGN GAAATGCNTT TNTTNATATG G

AT1G04560.1

Model type
Protein coding
Short Description
AWPM-19-like family protein
Computational Description
AWPM-19-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like family protein (TAIR:AT5G46530.1); Has 177 Blast hits to 177 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR