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11-0578-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 8899226 [Map]; Strand: c
      • AT3G24465.1 - [+] show detail - Plant thionin family protein
        Distance: -4086; Region: intergenic
      • AT3G24480.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: 1928; Region: intergenic
    Flanking Genome Sequence: 11-0578-1 - 3-prime edge 
    GTCGGAAAAC ATATATAGTA GAAATGTAAA ACTCTAATTT GCCTAGTTGA 
    ATT

AT3G24465.1

Model type
Protein coding
Short Description
Plant thionin family protein
Curator Summary
Encodes a Plant thionin family protein
Computational Description
Plant thionin family protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Plant thionin family protein (TAIR:AT5G36805.1); Has 74 Blast hits to 74 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G24480.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Computational Description
Leucine-rich repeat (LRR) family protein; FUNCTIONS IN: structural constituent of cell wall; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT4G13340.1); Has 128997 Blast hits to 49133 proteins in 1941 species: Archae - 161; Bacteria - 13645; Metazoa - 31793; Fungi - 8450; Plants - 59695; Viruses - 2612; Other Eukaryotes - 12641 (source: NCBI BLink).
Link
InterPro Scan - TAIR