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11-0580-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1335156 [Map]; Strand: c
      • AT1G04760.1 - [+] show detail - vesicle-associated membrane protein 726
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-0580-1 - 3-prime edge 
    CTTGTGGCAT TGTGTTATAT TCAGATTTTC TTCTAATCAA TGCCATGTCT 
    TGATTGGATA TGCAATCTGT TGTTTTCGTT CTGATTTTAA TCAGCTTTAT 
    GCATGGCTTC TTTGGAATGT TTATTGTGAA GATTTTTATG TTTGGAAAGC 
    T

AT1G04760.1

Model type
Protein coding
Short Description
vesicle-associated membrane protein 726
Curator Summary
member of Synaptobrevin -like protein family
Computational Description
vesicle-associated membrane protein 726 (VAMP726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 725 (TAIR:AT2G32670.1); Has 2469 Blast hits to 2468 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 990; Fungi - 448; Plants - 610; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink).
Link
InterPro Scan - TAIR