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11-0623-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12561062 [Map]; Strand: w
      • AT4G24200.1 - [+] show detail - Transcription elongation factor (TFIIS) family protein
        Distance: -118; Region: promoter
    Flanking Genome Sequence: 11-0623-1 - 3-prime edge 
    ACCATATGGG TGGGTTCTTG TTGACTCACA CAAGTTGGTA CATAATGAGC 
    CGGGCCGTGA GTCCCTACCG ATTCACTCTT CACACGCTTA GCACGTGCAG 
    TTTTCATCAA AAAACGCAAA CGAAATTGAG CAAAAAAATA AATATTCACC 
    AATCGCTTCA TAAGATTTTT AGTTATTAAA TATTTATTGC CAAAAAGAAT 
    AAACGAAGAA AAAGCCTTTT CTTCTCTCTC GTTTTCGCGA CAACCTTTTC 
    TTCGAAGAAG AAGAAGAACG AGGTTTTCTC TCAGAGCTGC CAACCATCGT 
    TGCCCGGAGA TTTAAAAAAC CTGTGATAAA TCGTAACTGA GTGAGAGATA 
    TATACACATA TATATACACA GAGGGACAAG GAAAGAGATT GGGATATGCG 
    AGTGCGCATC GGTTCTGTCG GAACGGCTAA CTCGCTTGAC CTAGGGTTTC 
    GTCTTCCTTG TGCTTCGTGG TGAGTTCTAT ATTCCTCTCT CTCTTTTTAC 
    AATGATGAAT AGCTCTGAAA TTCGCCTAGG GTTTATTAGT GGTATTCATT 
    NGGTCATCTG TCTTCAATTT TTTTAATCAC TTTTTGAATT GATCTTTGGA 
    ATCTTATTCA TTGAATTNGG CTTAATCTCA TATTATTTGG NCGNATAGTN 
    CTCCACATGT GTNGAATTTG GCTAGGTTTT TTCTTCTTTT AATTTTANGG 
    TTTNGACCCT GGAACCGGGG ATTTGGN

AT4G24200.1

Model type
Protein coding
Short Description
Transcription elongation factor (TFIIS) family protein
Computational Description
Transcription elongation factor (TFIIS) family protein; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923); Has 1174 Blast hits to 562 proteins in 174 species: Archae - 0; Bacteria - 342; Metazoa - 163; Fungi - 176; Plants - 109; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink).
Link
InterPro Scan - TAIR