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11-0651-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16394205 [Map]; Strand: w
      • AT4G34250.1 - [+] show detail - 3-ketoacyl-CoA synthase 16
        Distance: -503; Region: promoter
    Flanking Genome Sequence: 11-0651-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    GCATGCGTGG TCACTGACAA TGCTTTTAGC CAACCCGACC CAACTAGTTG 
    GATTATCCGG TAAATGATAT CATAAATCGA CAGAAAACTC ACAAAAAATG 
    ATCAAAATTT ACCACTTTTA ATTAGAAAAA TAAATATTAA CAACNTTATG 
    ATGGTAGAGT GGTTCGAAAT TCACTATGTT AGTTGAGATT TTAGTTATGG 
    TGTATGCACA AAAGTATTGG ACATCACAAC TACATATCGA TCTTAAGACA 
    TTGACAAACT AGTTATAAAA TATGCTGCTG CTTCTCTTGA TAACATTTGT 
    CATTCTTTAT AAATAATGCT AGAAAATGAT AAATGCGAGA AAACAAACAT 
    GTGCATTTCT CAAATCAGAA ACGAAATTGA CGCAACACTC AAGGTAGTAA 
    ATGCGAGTAA AACAAACAAC CACCTATTTT CTTACTCATA TCCATAAAAT 
    TCGCATCATT TTGCTTCANA ANAATT

AT4G34250.1

Model type
Protein coding
Short Description
3-ketoacyl-CoA synthase 16
Curator Summary
Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Computational Description
3-ketoacyl-CoA synthase 16 (KCS16); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: fatty acid elongation, response to light stimulus, very long-chain fatty acid metabolic process, response to osmotic stress; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 8 (TAIR:AT2G15090.1); Has 4922 Blast hits to 4907 proteins in 1227 species: Archae - 0; Bacteria - 1689; Metazoa - 0; Fungi - 21; Plants - 3079; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).
Link
InterPro Scan - TAIR