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11-0662-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 310332 [Map]; Strand: w
      • AT1G01890.1 - [+] show detail - pre-tRNA
        Distance: -985; Region: promoter
      • AT1G01900.1 - [+] show detail - subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 11-0662-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGTCTACATG TGATTCTTAG GACTGGTCTC TGTGGGTATA TAACACATAA 
    AAGATATATA TATATGTGAC GTGTGAATAC TGTGAGCAGT GGGAGCTGAG 
    GAAAATGTGA CTAGAAAGAG TAATATATAC NGAAAAGGTT AAATGAAATA 
    TATGATATGT TTTGTAACTG TCGCTGTTGT GAGGTTCTTG TGCGGGACCG 
    TCTGTTACTG AATGTTGCTT TAGCCTTTAG GGGACGTGGG TTCATTTATA 
    TATTTACCAA TAAAAACAAA CAAATACAAG CT

AT1G01890.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Lys (anticodon: CTT)
Link
InterPro Scan - TAIR

AT1G01900.1

Model type
Protein coding
Short Description
subtilase family protein
Curator Summary
Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide.
Computational Description
SBTI1.1; FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: extracellular matrix, apoplast, cell wall; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 6944 Blast hits to 6289 proteins in 1039 species: Archae - 198; Bacteria - 3931; Metazoa - 46; Fungi - 433; Plants - 1873; Viruses - 0; Other Eukaryotes - 463 (source: NCBI BLink).
Link
InterPro Scan - TAIR