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11-0725-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17661838 [Map]; Strand: c
      • AT4G37580.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 960; Region: intergenic
      • AT4G37590.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 1004; Region: intergenic
    Flanking Genome Sequence: 11-0725-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGATATTGAG AATGGTAATT ACTTGTGAAT CAAATCAACG ATCCGTATAT 
    TAATAACGTT TGTTTTTGTA ACGTTAAAAT CTATCATTAT TTGAATAAAA 
    TGAGAAATAT ATATTATTAA TTCATAGAAA TTGTGGGCNG TGTTCAACAC 
    CCAAACATCA CATTCTCATC CATCCCCCAC AAAAATCCGG GCGTGATATT 
    ATTTATTCGA AGGGAATATT CATTATGCGA GTGCGTCCGT AAGGAAAATG 
    ATGTAACATT AGCGTGAAGC TATTTCTATA TTTTTAACTC TTTTTTATGA 
    ACAAAATAAG AGAAAAGAAA ACGACGAAGA AGATTTTCTG CACAATGACG 
    GTGGCAAGTC AATTTAAAGT TATCATTTTT TGTCGGTCTA AAATATGGTT 
    TCTCCGACGA AACTTATTTA ATTCTCTCCT CATTTTAATT CAAAGACGGT 
    TTAAAAGTTC GCTGCATTTG TCAGTTATCA AATTTTCACG GAGCTTCCAA 
    ATAAGTTTTA TGATTAAATA AAAACGTCTA ACTAAAAAAA GTTTTATTCA 
    GTTTTATGCT TATTTTCCTT AATAAAAAGA AAAGAAGAGA ATGTTTTTTA 
    CCGTAGTCAA AAGTCTAATT AGATATGAAA TATCGACTTG GGCCCTAGTC 
    CAGTCTTATG GATCTCGATA CTGCCCGTAC ACAAGTCCAA AATAAAGTCA 
    AAGTCAACAA CTTTCAAAAT CAACA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17661774 [Map]; Strand: c
      • AT4G37580.1 - [+] show detail - Acyl-CoA N-acyltransferases (NAT) superfamily protein
        Distance: 896; Region: intergenic
      • AT4G37590.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 1068; Region: intergenic
    Flanking Genome Sequence: 11-0725-1 - 5-prime edge 
    CTCAATATGT TGCATTAATT ATTTCTTTTT GCTACTAGTG CTTTAGGATC

AT4G37580.1

Model type
Protein coding
Short Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Curator Summary
involved in apical hook development. putative N-acetyltransferase
Computational Description
HOOKLESS 1 (HLS1); CONTAINS InterPro DOMAIN/s: GCN5-related N-acetyltransferase, C-terminal (InterPro:IPR022610), GCN5-related N-acetyltransferase (InterPro:IPR000182), Acyl-CoA N-acyltransferase (InterPro:IPR016181); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferases (NAT) superfamily protein (TAIR:AT2G23060.1); Has 145 Blast hits to 145 proteins in 38 species: Archae - 22; Bacteria - 20; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37590.1

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Curator Summary
A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.
Computational Description
NAKED PINS IN YUC MUTANTS 5 (NPY5); FUNCTIONS IN: signal transducer activity; INVOLVED IN: flower development, response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT2G23050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR