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11-0777-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 6948866 [Map]; Strand: c
      • AT1G20040.1 - [+] show detail - pre-tRNA
        Distance: 0; Region: exon1 (NonCoding)
      • AT1G20050.1 - [+] show detail - C-8,7 sterol isomerase
        Distance: -177; Region: promoter
    Flanking Genome Sequence: 11-0777-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AGAAGTGGGG TTTGAACCCA CGCCCTCTTA CGAGGACCAG AACTTGAGTC 
    TGGCGCCTTA GACCACTCGG CCATCCTGAC GTTCCTGGTT GTAAATCTCA 
    TAGAGTTATT ATTAACTTGG ACAATTTAGT TTGACCAATT ATTTTATTAC 
    CAAACAAAAG ACACTTGAGT GAATGAATCG CCGGGATCGA GGAGATTAGT 
    AGTAGTAAGT CATCATCACT CAGATC

AT1G20040.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Leu (anticodon: CAA)
Link
InterPro Scan - TAIR

AT1G20050.1

Model type
Protein coding
Short Description
C-8,7 sterol isomerase
Curator Summary
C-8 sterol isomerase
Computational Description
HYDRA1 (HYD1); FUNCTIONS IN: C-8 sterol isomerase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Emopamil-binding (InterPro:IPR007905); Has 377 Blast hits to 377 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 119; Fungi - 175; Plants - 59; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR