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11-0791-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18973405 [Map]; Strand: w
      • AT3G51080.1 - [+] show detail - GATA transcription factor 6
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 11-0791-1 - 5-prime edge 
    ATCTCAGGTA ATTCCAATTT TAGTTTTTTT TGAAGGTTAC TTACTCGTCA 
    CATTGTTTGA AAAAGATTGA ATTTTTATCT GTGGCTTAGT CAAATCATGG 
    TTCGTTTCAC CAAGTTGTGG TTCTGGGTTT TCGTGATTTT TCTTTTGGGT 
    TTTTCTGTTT GAATTTGGAA AAATAAAGGA ACGTTTTTTT TTTCGGGGGG 
    AGTTTTTTTT TAAAAAANAA TTTTGGNAAA NTTTTNNANA NTNNNGGGGA 
    NCCCAAAAAA AAAAAAAAAA CCCNANTTNG NNTGGGGGGG GTTNNANNGN 
    AAAAAAGGGA AAGGGTNAAN TNGCCNTTAA AAANCAGTAC CNTAAAAAAA 
    AAANCCCTAC CCGGGGGCCC NAAAAAGGGN AANAATTTNN CCGNNANNAA 
    CTNGNTNNAN TTNNNAAAAA AAAAAAAAAA NAANANCNTT TNGNTTNAGN 
    ANAAGGCNAA TTTNAAAGNC CNCCAAAAAA AAGGNNTNTT NGNNAAAAAN 
    CCCCTTNCCN GGACCANCAA TTNNNCCNCC GTTAATTNCN ANNNTAGNGG 
    GNTTTCCNTN CCGGNNTAAN TNANNNNCCN GGTNNNNNNA AAANTTNTAN 
    NANTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18973289 [Map]; Strand: w
      • AT3G51080.1 - [+] show detail - GATA transcription factor 6
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0791-1 - 3-prime edge 
    CCTGAGATGA GAAGAGACAG AGAGTGAAGA GAGGAGATAT GTCGGTGAAT 
    GAGAAGAAGA AGAAGAAGAG TGGTGAGAAT TTAGAAGAAG AGGTGAGTTT 
    GGTAAAGCAT TGAATATGAT AGTGACTCCA GACCAAAGCC CTCTTCTCCT 
    AAAACTAAAA AAGTTGTGAG TTTCTCTTCT TTATTCTTTC TCAATCTCTT 
    ATTTTCCCAA GAACCAAAAA AAAAAGATAA AANTTGAANT TTTTTGCTTT 
    GGGGGGACTN TTTTTTTTTC CCTTTTTCCN CACCCGGCAA AANTTCNTAA 
    AAANGTCTNC TTTTTGTAAA TNCAAANCGT CCNTCCCCCC TCCTGGGAAC 
    CTANANATGN CTGAAAAAAN ANCGGNCTCN TTTTCNTTCC CCANTCNCNT 
    NCNTTTTTGG NCTNTTTNGG NCTTTNTNGG NCTGGNCTTT CTNAANTTTT 
    NCAATTNGGG TTTNTNNTTA NCAANGGCTT TTNTCCNCCC GTNTTNTTCA 
    NTTCAAAACN GTTNGGGANG ATTCCNCACC GATTTNCNAT TAAAAGCT

AT3G51080.1

Model type
Protein coding
Short Description
GATA transcription factor 6
Curator Summary
Encodes a member of the GATA factor family of zinc finger transcription factors.
Computational Description
GATA transcription factor 6 (GATA6); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 5 (TAIR:AT5G66320.2); Has 1500 Blast hits to 1468 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 554; Plants - 766; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Link
InterPro Scan - TAIR