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11-0795-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8183615 [Map]; Strand: c
      • AT5G24160.1 - [+] show detail - squalene monoxygenase 6
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 11-0795-1 - 5-prime edge 
    CGTCAGGGAT GATGGCTCTG CTCGGCGGCA TGAATCCTCG TCCTCTCTCT 
    CTCGTCTATC ATCTTTGTGC CATCACTCTA TCCTCCATTG GCCAACTGCT 
    CTCTCCATTT CCCTCTCCCC TTCGCATTTG GCATAGCCTC AAGCT

AT5G24160.1

Model type
Protein coding
Short Description
squalene monoxygenase 6
Computational Description
squalene monoxygenase 6 (SQE6); FUNCTIONS IN: squalene monooxygenase activity, oxidoreductase activity, FAD binding; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Squalene epoxidase (InterPro:IPR013698), FAD dependent oxidoreductase (InterPro:IPR006076); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT5G24150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR