1. Home
  2. Mutant Lines
  3. 11-0809-1

11-0809-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26916091 [Map]; Strand: w
      • AT5G67440.1 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G67440.2 - [+] show detail - Phototropic-responsive NPH3 family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0809-1 - 3-prime edge 
    GTGGAGGCGG TGGTGCTGAT TCAGAGAGTG GGGTATTGTA AGGAGAGAGA 
    GATAAAGGGG ACAGAACATT CTGAAGGGTT TTCAGATTTG CACTAAAGGA 
    GAAGGACGAC GAAGAAACAA CAGCTCATCT TCTTTTGATT TTCTCTGTTT 
    TTTTCTTTCT TTCTTTCTTT TTACTTTTTA GAGTTTTTTT TGTTGGATTG 
    CTGTTTTGTG TTTTGTCGGA TTACTCTTGG ATTANATAGA GTTCTCTGTT 
    CCTCTCTCTG TCTACTACAC ACAAAGCAGC AGCAATATAG CCCACACTTT 
    TTTGCCTCTT GTCTTTGTTT CATTTCATCG AATTGATCCT AAANAAGGTT 
    TCTTTTCCCA CCACCAAAGG TATGATTTTT CGTTCATTCC AAACTCATTT 
    TACTCTGAAT TTTGCTGATT TTAGGTCCAT AAGTCGATAT AAACCCCTAA 
    AAATCACCTT TTTAANAGTT TGTGAGTAAT TTGTGTGACT CTGCACATAT 
    AAAGTTCTTA GTTTTGTANA TTTTAACACA TGTTTTGGTC TCTAAANACC 
    AAAAATTTGT TCGATCTGAT TTGTTATAAT TANATTAATC TCTANTTTTT 
    GGATAATTGT TTTATTTCAT TAACATAACA NAATCTTTTT TGATCTCCAT 
    AGNGNNNNNG NNNNATTNTT NCTTCNCTTN AANGCTTTNG TNCCTCAACA 
    CAAACCAAAA ACTGNTTTTT T

AT5G67440.1

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Curator Summary
A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.
Computational Description
NAKED PINS IN YUC MUTANTS 3 (NPY3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: flower development, response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT4G37590.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67440.2

Model type
Protein coding
Short Description
Phototropic-responsive NPH3 family protein
Curator Summary
A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.
Computational Description
NAKED PINS IN YUC MUTANTS 3 (NPY3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: flower development, response to light stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NPH3 (InterPro:IPR004249), BTB/POZ fold (InterPro:IPR011333); BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein (TAIR:AT4G37590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR