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Mutant Lines
11-0818-1

11-0818-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 9511366 [Map]; Strand: w
- AT5G27030.1 - [+] show detail - TOPLESS-related 3
  Distance: 0; Region: exon17 (CDS)
- AT5G27030.2 - [+] show detail - TOPLESS-related 3
  Distance: 0; Region: exon16 (CDS)

GCTCCTGTTG CGTCTGTCAA TTGTAAAGTT GAACGAGGCT CTCCTGTTAG 
ACACTCACAA ATGCTGGTAA AATCACTCAT TAAATGCTAT GTTTCTAGCC 
ATTTCTATAA TTTATTATTC TGTTCTGGAT TTTCGGTTGT AAATGAAGTG 
AACNTTCCAT TTGTCGAAAT TGTAGTTTAC TATTCTCTGA CTATAGTAGT 
TGACNTGTTT CCGATTTTTT TGTCATGTTT AAAAAAAATA TTTACTAATC 
TTTTTTTTCT GAATATCCTC AAGAATGGAG TTGATCCCTC AAAGTCGAGA 
ATCGATGACT CAACAGACAA ACCAAAATCT TGGCAATTAG CTGAAATCTT 
GGACCCTTCC CAGTGTTTCC AAGCTACTTT ACCCGATACC GCTGGTTCTT 
CCACAAAGGT TTGTGCAGTT ATCTTTCTCA NAAAGTTGTT GGATTTCTAT 
AAATGTTTTG AAATTGAGGC TTAATTTTCT CATGCTGCGT GGGAAAGCAG 
GTTGTTCAGC TTCTGTATAC GAATT

AT5G27030.1

Model type: Protein coding
Short Description: TOPLESS-related 3
Computational Description: TOPLESS-related 3 (TPR3); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G27030.2

Model type: Protein coding
Short Description: TOPLESS-related 3
Computational Description: TOPLESS-related 3 (TPR3); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1).
Link: InterPro Scan - TAIR