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11-0819-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30082194 [Map]; Strand: c
      • AT1G79970.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G79970.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0819-1 - 5-prime edge 
    AATGCAGGTG CTCGATTTTA CAAGTTGGAG AAATGCAAAT GAACAATTTT 
    GGAGCTTCTC CTTCTTCTTC TTGTCGTCGT TATCTTCTCT CTCACTTATA 
    ATTTGGCTGG TGGTGCAGTA CTCTGTGATT GATTGATTGA TTGATTTTTA 
    GGAAGCAAAG AGAGAATACG TACAAGACTC GTATTGTTTG CCTTGCCTCT 
    GTATTTTCCT CTTATAAAAA CAAAATTATT TTCCATAAGA GAGAAAAAAA 
    AAAAAAAAAN ANNGNAAAAA ANNNNNAAAA AAAAANCCNG NANCCCCCCC 
    CCNAANGGNA NGGGNNCCCC NNNNAANNNN NAAAANGNTT TTNNNTTTAA 
    NTTTTTTTTT NAAAAAAAAA AAAAAANTTT TNNNNNCCCC CAAAAAAAAA 
    AAAAAAAANT TTNNNNCCNG GGNNGGGAAN NNNCCNGGCC CTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30082310 [Map]; Strand: c
      • AT1G79970.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
      • AT1G79970.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0819-1 - 3-prime edge 
    CCTGCATTTG GGGGCTTTCC TCTTATCTGG AAACAAAGAG AGCCGCCACT 
    GATGGTAAAT TTGCTTTTCA TCCTTAACCT CTCTACTTCT TCTTCTTCTT 
    CTTCTTCTTC TTCTTCTTCT ACTACCACTA CTTTTTGAGA TTCTATCTAT 
    CTATAGTCAT CCATTTTGAC TAGGAGACTT TATATTATTT TCTTCATTTG 
    AAAGATTCTC TATACATAGA TAGTCATCGA TTGTGTTTCT GTGTGTGTCT 
    GCAATATCTG TAGTTTTGAT TTGAAACTTG CCTGAATCAA ATCCAACCAT 
    GAATT

AT1G79970.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79970.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT2G25690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR