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11-0822-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19385015 [Map]; Strand: w
      • AT1G52100.1 - [+] show detail - Mannose-binding lectin superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT1G52100.2 - [+] show detail - Mannose-binding lectin superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0822-1 - 5-prime edge 
    ACCAGAAGCA CCATGGATTG GTCCAATAAC CTTTTTCCCA GCCTTGACAT 
    ACTCAAACTT GATGAACTGA ATACCTTCAA GACCACCTCG TACATATATC 
    TTTGTTACAT CATGATAGTC TGATCCATCA TCCCACTGGA TC

AT1G52100.1

Model type
Protein coding
Short Description
Mannose-binding lectin superfamily protein
Computational Description
Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: shoot, cotyledon, hypocotyl, leaf; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT5G35940.1); Has 1742 Blast hits to 773 proteins in 43 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 4; Plants - 1729; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G52100.2

Model type
Protein coding
Short Description
Mannose-binding lectin superfamily protein
Computational Description
Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: shoot, hypocotyl; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT5G35950.1).
Link
InterPro Scan - TAIR