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11-0827-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1384371 [Map]; Strand: w
      • AT1G04900.1 - [+] show detail - Protein of unknown function (DUF185)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 11-0827-1 - 5-prime edge 
    CTTTTATAAA ACTAACAAAA TCGGTTATTC TGATAACGGT CGGTACGGGA 
    TTTTCCCATC CTACTTTCAA GATCCAATAC AAGGCTACTT CTCTCAACGG 
    TCAAAATCTG TCGGGGTTTT GGAGAGAAGC ATTAAGTTCA ACCAGCTTGA 
    AGGTAGGCGC AAAGTTCAAC TTTCACTTGC TTAAGTGTTT AATTCTTGAA 
    TTTTAGCCAC GCCTCTATAA CTGCCCTGAA ACTATAGCAA TATCAGTTCT 
    TACTCTACAT GAGATGCATC ATGATCTTTG TTTGGCTAGT TATCTGTTGT 
    TTCTTATGGT TATATTATCT CTTTTATGTC TAGTAAGTCG ATAGTTTTCC 
    TTGTCCTAGG GAGGAAAGCA TACATGAAAC TCTTGGAAAA AGTATACAAG 
    CAGAGTGACA TTTCTTGGTT TACTCCAGTG GAGCTTTTCA AGGTGAAATG 
    TTTGTGGATA GATTCTTTGG TGTTTTCTTT GATTAGCCTT CACTTGTTGT 
    ATTTATCCTA TTTTATCATG CCAATCATCT CTTGTAGCCT TGGTATGCTC 
    ATGGGATTGC AGAAGCTATA CTGCGTACCA CAAATCTCTC AGTTCCATTA 
    AAGGTTTGCT TATCTGATCG TCCACATCTG TATTTTATTT AATTTCAAGA 
    CAAAACAAAA CCTGATATTA TGTCTCTGAT TTCTGTAGTT ATATGAAAAG 
    TTTTGAATCT AGTTAGTCCT GACCTATCTT TACCTATCAG ACTGCAGGAA 
    ACTAGTTAGT GATAGCCTAG GCCTTTANCT GNTCTGTTCA TGCTTTAAAA 
    CTTGAAATAA AAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1384333 [Map]; Strand: w
      • AT1G04900.1 - [+] show detail - Protein of unknown function (DUF185)
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 11-0827-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    TTCAGATTAA CCAACCATTT AGTCTCACAT TCTAGAAATC GCCAAATGAG 
    AATGAAATCT GATAAACATC AAGACTCGGA TCTGGAGAGA ACTATGAGAC 
    TGTAAACACA AAACGGAGAC AGAAATTCTT AACAAGGATT CAAAACAGCT 
    AACTCAGAGC AGAAAAATTT CTTTGAAATA CGAAAAGTTT TGCCTTTTGC 
    ATTGCTTAAG GTTGATCGAT TTGTCATTAA TATTACTTAT CAAGTAGGTA 
    AATCTGAACC ATCGAAAAAC TCTGAGAGAT TGAGAAGAAA CTCACGAGAA 
    CTGGTTCATC CCCTATGAGC TTCTGAGTAG AGAAGAAAGC TCGAAGCGAT 
    CCAAGACATG GCAGCTCGAA TTGATCAACA TTTCGTGGAA TCTTCCGACA 
    AGGGATATAT CGAACGAAAG CCATTTCTGN GGATTCTCTC TCTATCTCTA 
    CGATGGCTCG ATCGACATTC GAGAATCGAG ATACAGAAGG AACTCACCGG 
    TTCAGGAGGT TTCATAGAGG TTTAGGGTTT AGATCCGGTT TAATTCGACC 
    GTTCTATATT CATAATCCTT GGTTCTCTTC TTATTATACC AAGTTCGGTT 
    TGTTTAAAAT TTAAGCTACC ANCCCGGGCC GNNNACCACN CGTNCCCCTN 
    T

AT1G04900.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF185)
Computational Description
Protein of unknown function (DUF185); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788); Has 316 Blast hits to 314 proteins in 164 species: Archae - 0; Bacteria - 117; Metazoa - 2; Fungi - 113; Plants - 44; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR