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11-0834-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1333579 [Map]; Strand: w
      • AT1G04750.1 - [+] show detail - vesicle-associated membrane protein 721
        Distance: -12; Region: promoter
      • AT1G04750.2 - [+] show detail - vesicle-associated membrane protein 721
        Distance: -45; Region: promoter
    Flanking Genome Sequence: 11-0834-1 - 5-prime edge 
    TCTAGAAGAC TATGAAAGAA CAAAACGAGG ACTAAAGTGG ACATGGGAGA 
    AGAAAAAGTT GAAAAGCGGG CAAGGGTAAA GTTGTCATTT AAGGTAGTCA 
    GATTGGGTCA AAAATAGTAT AAAACCTTGA ATTTAAGGAC TAAAAAAAAA 
    CAATTTCAAA ACGGAGAGAT CAAACAAATG TCGAGAAAGT TGGACCCGCC 
    CGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1333515 [Map]; Strand: w
      • AT1G04750.1 - [+] show detail - vesicle-associated membrane protein 721
        Distance: 0; Region: exon1 (5UTR)
      • AT1G04750.2 - [+] show detail - vesicle-associated membrane protein 721
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 11-0834-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGCTTCTAGA TCTGTAGTTT TTTTCCGCGA CCGCCCAAAA AATTCTCTGA 
    TCAGACGGTC GATTGGATCG GAGATTTAAG GTAAAGAAAA AATGGCGCAA 
    CAATCCGTTG ATCTACAGTT TTGTAGCTCG CTGGCACGGG TGATCCTCGT 
    TGAGTTCACT GATTTCAAAG GTAATTTCAC CTCAATCGCT GCTCAGTGCC 
    TCCAGAAGCT

AT1G04750.1

Model type
Protein coding
Short Description
vesicle-associated membrane protein 721
Curator Summary
vesicle-associated membrane protein 7B (At VAMP7B) mRNA,
Computational Description
vesicle-associated membrane protein 721 (VAMP721); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: synaptobrevin-related protein 1 (TAIR:AT2G33120.1); Has 2472 Blast hits to 2471 proteins in 261 species: Archae - 0; Bacteria - 0; Metazoa - 997; Fungi - 453; Plants - 611; Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04750.2

Model type
Protein coding
Short Description
vesicle-associated membrane protein 721
Curator Summary
vesicle-associated membrane protein 7B (At VAMP7B) mRNA,
Computational Description
vesicle-associated membrane protein 721 (VAMP721); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: synaptobrevin-related protein 1 (TAIR:AT2G33120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR